RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 IBTKQ9P2D0 1353 aaPredicted RBP10.45□□□□□ -0.74
RPSA-209ENST00000495394 LRP5O75197 1615 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 TTI1O43156 1089 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 NMT2O60551 498 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 DIAPH2O60879 1101 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 MASP1P48740 699 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 SEC13P55735 322 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 BNIP1Q12981 228 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 LRRC41Q15345 812 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 INAQ16352 499 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 GBP6Q6ZN66 633 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 ABTB2Q8N961 1025 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 WHAMMQ8TF30 809 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 CCDC114Q96M63 670 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 DBNDD1Q9H9R9 158 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 STAP2Q9UGK3 403 aa10.45□□□□□ -0.74
RPSA-209ENST00000495394 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 TMEM221A6NGB7 291 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 TRIM64A6NGJ6 449 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 SNX2O60749 519 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 RHOBTB3O94955 611 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 ZFXP17010 805 aaPredicted RBP10.44□□□□□ -0.74
RPSA-209ENST00000495394 DNAJA1P31689 397 aaKnown RBP10.44□□□□□ -0.74
RPSA-209ENST00000495394 ROR1Q01973 937 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
RPSA-209ENST00000495394 BTN2A1Q7KYR7 527 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 DGLUCYQ7Z3D6 616 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 NANOGNBQ7Z5D8 188 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 KIAA1328Q86T90 577 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 TMCO5AQ8N6Q1 288 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 USP38Q8NB14 1042 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 CCDC150Q8NCX0 1101 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 RBM18Q96H35 190 aaKnown RBP10.44□□□□□ -0.74
RPSA-209ENST00000495394 DNAAF2Q9NVR5 837 aaKnown RBP10.44□□□□□ -0.74
RPSA-209ENST00000495394 IL20Q9NYY1 176 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 ZKSCAN5Q9Y2L8 839 aa10.44□□□□□ -0.74
RPSA-209ENST00000495394 SLIT3O75094 1523 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
RPSA-209ENST00000495394 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
RPSA-209ENST00000495394 BTG3Q14201 252 aaPredicted RBP10.43□□□□□ -0.74
RPSA-209ENST00000495394 ARHGAP22Q7Z5H3 698 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 PPFIBP1Q86W92 1011 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 TRIML2Q8N7C3 387 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 UQCC2Q9BRT2 126 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 TRIM4Q9C037 500 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 GTF2A1LQ9UNN4 478 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 ENPP3O14638 875 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 TSPAN6O43657 245 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 ABL1P00519 1130 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 SLC4A1P02730 911 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 PRLRP16471 622 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 TMOD1P28289 359 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 ATP5DP30049 168 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 PRKAR2BP31323 418 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 GCKP35557 465 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 GPS2Q13227 327 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 MOGSQ13724 837 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 THOC7Q6I9Y2 204 aaKnown RBP10.43□□□□□ -0.74
RPSA-209ENST00000495394 TMC6Q7Z403 805 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 SPERTQ8NA61 448 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 GALNT6Q8NCL4 622 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 ARHGAP45Q92619 1136 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 LCMT1Q9UIC8 334 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 USP31Q70CQ4 1352 aa10.43□□□□□ -0.74
RPSA-209ENST00000495394 OVOS2A0A0J9YW53 1432 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 OVOS2Q6IE36 1432 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 GOLGA6L10A6NI86 522 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 SCAMP3O14828 347 aaKnown RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 CASQ2O14958 399 aaPredicted RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 CAP2P40123 477 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 STT3AP46977 705 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 TPD52P55327 224 aaPredicted RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 STK3Q13188 491 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 HIBCHQ6NVY1 386 aaPredicted RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 DSTYKQ6XUX3 929 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 CPXCR1Q8N123 301 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 IQUBQ8NA54 791 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 SPATA18Q8TC71 538 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.741e-9■■■□□ 17
RPSA-209ENST00000495394 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 CCPG1Q9ULG6 757 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 USP19O94966 1318 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 KRT13P13646 458 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 NLRP6P59044 892 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 G3BP1Q13283 466 aaKnown RBP eCLIP10.42□□□□□ -0.74
RPSA-209ENST00000495394 CEP68Q76N32 757 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 IFNL2Q8IZJ0 200 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 TSGA13Q96PP4 275 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 SRRTQ9BXP5 876 aaKnown RBP10.42□□□□□ -0.74
RPSA-209ENST00000495394 CYP4F11Q9HBI6 524 aa10.42□□□□□ -0.74
RPSA-209ENST00000495394 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms