RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 M0R2N6 131 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 PRPF40AO75400 957 aaKnown RBP12.65□□□□□ -0.38
PKP4-215ENST00000494945 FDX1P10109 184 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 ADCY7P51828 1080 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 HMGCS2P54868 508 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 NR5A1Q13285 461 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 PPIL2Q13356 520 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
PKP4-215ENST00000494945 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
PKP4-215ENST00000494945 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 COA7Q96BR5 231 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 SLF1Q9BQI6 1058 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 RTEL1Q9NZ71 1219 aa12.65□□□□□ -0.38
PKP4-215ENST00000494945 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
PKP4-215ENST00000494945 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
PKP4-215ENST00000494945 LCTP09848 1927 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 TRAF5O00463 557 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 CXCL11O14625 94 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 YEATS4O95619 227 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
PKP4-215ENST00000494945 NBR1Q14596 966 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 ZNF526Q8TF50 670 aaPredicted RBP12.64□□□□□ -0.39
PKP4-215ENST00000494945 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
PKP4-215ENST00000494945 CUL5Q93034 780 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 RPAP3Q9H6T3 665 aaPredicted RBP12.64□□□□□ -0.39
PKP4-215ENST00000494945 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
PKP4-215ENST00000494945 CCDC194A0A1B0GVG4 234 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 FLOT1O75955 427 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 TRAPPC10P48553 1259 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
PKP4-215ENST00000494945 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
PKP4-215ENST00000494945 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
PKP4-215ENST00000494945 FBXO28Q9NVF7 368 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 PPP1R9AQ9ULJ8 1098 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 PCDHA6Q9UN73 950 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 KCNH4Q9UQ05 1017 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 PCDHA8Q9Y5H6 950 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
PKP4-215ENST00000494945 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 TRAK2O60296 914 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 MBD3O95983 291 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
PKP4-215ENST00000494945 UBE2HP62256 183 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 DGKZQ13574 1117 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 STK38Q15208 465 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 MCTP2Q6DN12 878 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
PKP4-215ENST00000494945 C2orf69Q8N8R5 385 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 ZNF408Q9H9D4 720 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 GBA2Q9HCG7 927 aaPredicted RBP12.62□□□□□ -0.39
PKP4-215ENST00000494945 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
PKP4-215ENST00000494945 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 ABCB11O95342 1321 aa12.62□□□□□ -0.39
PKP4-215ENST00000494945 ADAMTS3O15072 1205 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
PKP4-215ENST00000494945 BMP15O95972 392 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 ICAM1P05362 532 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 SNAP25P60880 206 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 CEBPZQ03701 1054 aaKnown RBP12.61□□□□□ -0.39
PKP4-215ENST00000494945 COG2Q14746 738 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
PKP4-215ENST00000494945 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms