RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 KIF5BP33176 963 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 ICA1Q05084 483 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 SH3TC2Q8TF17 1288 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 BRI3BPQ8WY22 251 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 RNF26Q9BY78 433 aaPredicted RBP10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 EFCC1Q9HA90 598 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 KCNJ14Q9UNX9 436 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 MYH1P12882 1939 aa10.4□□□□□ -0.74
RN7SL538P-201ENST00000494227 F5H6K3 240 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 GNAQP50148 359 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 DNM1Q05193 864 aaKnown RBP10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 KLRC3Q07444 240 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 SLFN13Q68D06 897 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 OPTNQ96CV9 577 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 SLC10A4Q96EP9 437 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 MS4A4AQ96JQ5 239 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 GDPD2Q9HCC8 539 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 VAT1LQ9HCJ6 419 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
RN7SL538P-201ENST00000494227 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 PRPF40AO75400 957 aaKnown RBP10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 USP2O75604 605 aaPredicted RBP10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 NDUFB10O96000 172 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 PYGBP11216 843 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 TIE1P35590 1138 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 SLC16A2P36021 539 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 SP3Q02447 781 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 SLC9C1Q4G0N8 1177 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 KCTD1Q719H9 257 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 PIGSQ96S52 555 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 NUP88Q99567 741 aaPredicted RBP10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 RIOX1Q9H6W3 641 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 VPS54Q9P1Q0 977 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 TRPC6Q9Y210 931 aa10.38□□□□□ -0.75
RN7SL538P-201ENST00000494227 TESPA1A2RU30 521 aaPredicted RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 BTBD18B2RXH4 712 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 MGAMO43451 1857 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 CTNND1O60716 968 aaKnown RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 SCG2P13521 617 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 CTGFP29279 349 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 AKAP17AQ02040 695 aaKnown RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 VGLL4Q14135 290 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 NPY5RQ15761 445 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 PFKFB3Q16875 520 aaPredicted RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 CCDC96Q2M329 555 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 ASPRV1Q53RT3 343 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 RGS22Q8NE09 1264 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 GMCL1P1Q8NEA9 526 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 WASF1Q92558 559 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 ZKSCAN4Q969J2 545 aaPredicted RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 SPZ1Q9BXG8 430 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 ZNF341Q9BYN7 854 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 ZSCAN16Q9H4T2 348 aaPredicted RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 JMJD4Q9H9V9 463 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 PPP2R3BQ9Y5P8 575 aa10.37□□□□□ -0.75
RN7SL538P-201ENST00000494227 USP17L10C9JJH3 530 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 RAD21O60216 631 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 GADD45BO75293 160 aaPredicted RBP10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 MMP1P03956 469 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 SNAP25P60880 206 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 MTFR1Q15390 333 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 DCAF15Q66K64 600 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 WWC2Q6AWC2 1192 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 ADGRF4Q8IZF3 695 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 DCAF4Q8WV16 495 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 PHF20Q9BVI0 1012 aa10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 BMP2KQ9NSY1 1161 aaPredicted RBP10.36□□□□□ -0.75
RN7SL538P-201ENST00000494227 CCL15-CCL14A0A0B4J2E2 113 aa10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 FAM205CA6NFA0 338 aa10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 STXBP3O00186 592 aa10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 ASNSP08243 561 aa10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 BMP3P12645 472 aa10.35□□□□□ -0.75
RN7SL538P-201ENST00000494227 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms