RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 ANKRD23Q86SG2 305 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 KIAA1524Q8TCG1 905 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 C8orf76Q96K31 380 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 SLC26A6Q9BXS9 759 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 DEFB129Q9H1M3 183 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 NEFHP12036 1026 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 GUCY1A2P33402 732 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 IRX1P78414 480 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ICA1Q05084 483 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ANGEL2Q5VTE6 544 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 FBXO18Q8NFZ0 1043 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 GOLGA5Q8TBA6 731 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ZC3H15Q8WU90 426 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 SPZ1Q9BXG8 430 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 TSPY26PQ9H489 355 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 GGA3Q9NZ52 723 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 CLIP2Q9UDT6 1046 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 MAD2L2Q9UI95 211 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 V9GYY5 206 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 IQCA1LA6NCM1 817 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 IPO7O95373 1038 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PLEKHA8P1O95397 391 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PDHBP11177 359 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 XBP1P17861 261 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 CAP2P40123 477 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 HIRAP54198 1017 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 RESTQ13127 1097 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 TRIM29Q14134 588 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 GPATCH4Q5T3I0 446 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 MMS22LQ6ZRQ5 1243 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 CDC37L1Q7L3B6 337 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PACS2Q86VP3 889 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 GMCL1P1Q8NEA9 526 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PPM1EQ8WY54 764 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 PHKBQ93100 1093 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ZNF341Q9BYN7 854 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ZBTB21Q9ULJ3 1066 aa8.22□□□□□ -1.09
SMARCE1-211ENST00000493660 ASTN2O75129 1339 aaPredicted RBP8.21□□□□□ -1.09
SMARCE1-211ENST00000493660 OTOFQ9HC10 1997 aa8.21□□□□□ -1.09
SMARCE1-211ENST00000493660 GDF11O95390 407 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 MBD3O95983 291 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 CPP00450 1065 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 GH2P01242 217 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 ASNSP08243 561 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 EEF2P13639 858 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 SEPT2Q15019 361 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 ZSCAN26Q16670 478 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 ATL3Q6DD88 541 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 ZNF112Q9UJU3 913 aa8.21□□□□□ -1.1
SMARCE1-211ENST00000493660 PHF20L1A8MW92 1017 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 hCG_1984214I3L0E3 225 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 CTNND1O60716 968 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 ZNF543Q08ER8 600 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SUPT20HL1Q3ZLR7 823 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 KMT5BQ4FZB7 885 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 BRAPQ7Z569 592 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 LRRC47Q8N1G4 583 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 ZNF713Q8N859 430 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 DCPSQ96C86 337 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 NUCKS1Q9H1E3 243 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SH3GLB2Q9NR46 395 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 KLRF2D3W0D1 207 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 NRDCO43847 1150 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 COQ9O75208 318 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 ERCC3P19447 782 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 EPHX2P34913 555 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 PKN1Q16512 942 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 PFKFB3Q16875 520 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 JAKMIP3Q5VZ66 844 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 KRT40Q6A162 431 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SIAH1Q8IUQ4 282 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 CDAN1Q8IWY9 1227 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 TMEM87AQ8NBN3 555 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 ZNF526Q8TF50 670 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 FAM212AQ96EL1 285 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 RIOX1Q9H6W3 641 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 LCMT1Q9UIC8 334 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 TMX2Q9Y320 296 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 SSC5DA1L4H1 1573 aa8.2□□□□□ -1.1
SMARCE1-211ENST00000493660 USP17L5A8MUK1 530 aa8.19□□□□□ -1.1
SMARCE1-211ENST00000493660 IVLP07476 585 aa8.19□□□□□ -1.1
SMARCE1-211ENST00000493660 SCG2P13521 617 aa8.19□□□□□ -1.1
SMARCE1-211ENST00000493660 JAG1P78504 1218 aa8.19□□□□□ -1.1
SMARCE1-211ENST00000493660 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMARCE1-211ENST00000493660 NOL9Q5SY16 702 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms