RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MZB1Q8WU39 189 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 C20orf173Q96LM9 149 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 KCNC2Q96PR1 638 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 AP5S1Q9NUS5 200 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 KLHL14Q9P2G3 628 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 ACSL6Q9UKU0 697 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 ZNRF3Q9ULT6 936 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 SHROOM4Q9ULL8 1493 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 FAM86C2PA6NEL3 165 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 ACRP10323 421 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 ZNF76P36508 570 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 PMS1P54277 932 aaKnown RBP5.57□□□□□ -1.52
PTCD3-218ENST00000493430 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 CWF19L1Q69YN2 538 aaKnown RBP5.57□□□□□ -1.52
PTCD3-218ENST00000493430 CRTC3Q6UUV7 619 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 NUP43Q8NFH3 380 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 RELTQ969Z4 430 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 DACT3Q96B18 629 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-218ENST00000493430 CECR2Q9BXF3 1484 aa5.57□□□□□ -1.52
PTCD3-218ENST00000493430 A0A1W2PQ27 194 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 A0A1W2PQ64 194 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 A0A1W2PQC6 194 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 A0A1W2PQD8 194 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 C9IYK1 514 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 AFF3P51826 1226 aaKnown RBP5.56□□□□□ -1.52
PTCD3-218ENST00000493430 CDR1P51861 262 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 ANKRD39Q53RE8 183 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 NOL9Q5SY16 702 aaKnown RBP5.56□□□□□ -1.52
PTCD3-218ENST00000493430 LDLRAD1Q5T700 205 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 USP48Q86UV5 1035 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 TAB3Q8N5C8 712 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-218ENST00000493430 NAT16Q8N8M0 369 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 TMEM52Q8NDY8 209 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 SMARCC1Q92922 1105 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-218ENST00000493430 FERD3LQ96RJ6 166 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
PTCD3-218ENST00000493430 NUDT19A8MXV4 375 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 IRS4O14654 1257 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-218ENST00000493430 TRIM13O60858 407 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 SASH1O94885 1247 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 GSTM1P09488 218 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-218ENST00000493430 CEBPAP49715 358 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-218ENST00000493430 CBX2Q14781 532 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-218ENST00000493430 RTP2Q5QGT7 225 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 CNKSR3Q6P9H4 555 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 TMC6Q7Z403 805 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 LDHDQ86WU2 507 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 JMJD8Q96S16 334 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 SLC12A9Q9BXP2 914 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 BACH2Q9BYV9 841 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 EPB41L4AQ9HCS5 686 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-218ENST00000493430 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
PTCD3-218ENST00000493430 SHOXO15266 292 aa5.54□□□□□ -1.52
PTCD3-218ENST00000493430 ZNF16P17020 682 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-218ENST00000493430 NOP2P46087 812 aaKnown RBP5.54□□□□□ -1.52
PTCD3-218ENST00000493430 NR1I3Q14994 352 aa5.54□□□□□ -1.52
PTCD3-218ENST00000493430 TDRD10Q5VZ19 366 aaKnown RBP5.54□□□□□ -1.52
PTCD3-218ENST00000493430 FBXW10Q5XX13 1052 aa5.54□□□□□ -1.52
PTCD3-218ENST00000493430 JAMLQ86YT9 394 aa5.54□□□□□ -1.52
PTCD3-218ENST00000493430 TNFRSF12AQ9NP84 129 aa5.54□□□□□ -1.52
PTCD3-218ENST00000493430 SMARCA4P51532 1647 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 A0A0G2JLL6 359 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 TP53P04637 393 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 ZNF445P59923 1031 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 MVKQ03426 396 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 AXDND1Q5T1B0 1012 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 DCAF15Q66K64 600 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 RPTNQ6XPR3 784 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 FAM129CQ86XR2 697 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 IGDCC3Q8IVU1 814 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 TMEFF1Q8IYR6 380 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 RBBP8NLQ8NC74 664 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 GP6Q9HCN6 339 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 METTL5Q9NRN9 209 aaKnown RBP5.53□□□□□ -1.52
PTCD3-218ENST00000493430 PCDHA5Q9Y5H7 936 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 FHOD1Q9Y613 1164 aa5.53□□□□□ -1.52
PTCD3-218ENST00000493430 A0A1W2PQJ5 194 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 H0Y8X5 98 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 BUB1BO60566 1050 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-218ENST00000493430 CD247P20963 164 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 GUCY2CP25092 1073 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 MAPKAPK2P49137 400 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 FANCCQ00597 558 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 NFIXQ14938 502 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 ZC3H14Q6PJT7 736 aaKnown RBP5.52□□□□□ -1.53
PTCD3-218ENST00000493430 CYP2R1Q6VVX0 501 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 UNC5AQ6ZN44 842 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 BRF1Q92994 677 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 PWWP2AQ96N64 755 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 SRRTQ9BXP5 876 aaKnown RBP5.52□□□□□ -1.53
PTCD3-218ENST00000493430 XYLT2Q9H1B5 865 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 PPT2Q9UMR5 302 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 SF3B6Q9Y3B4 125 aaKnown RBP5.52□□□□□ -1.53
PTCD3-218ENST00000493430 KIF21AQ7Z4S6 1674 aa5.52□□□□□ -1.53
PTCD3-218ENST00000493430 FGF10O15520 208 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms