RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 BTAF1O14981 1849 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
TPR-208ENST00000492973 TMPRSS2O15393 492 aa8.83□□□□□ -1
TPR-208ENST00000492973 CALD1Q05682 793 aaKnown RBP8.83□□□□□ -1
TPR-208ENST00000492973 LRRC14Q15048 493 aa8.83□□□□□ -1
TPR-208ENST00000492973 ZNF827Q17R98 1081 aa8.83□□□□□ -1
TPR-208ENST00000492973 TTBK2Q6IQ55 1244 aa8.83□□□□□ -1
TPR-208ENST00000492973 TRMT2AQ8IZ69 625 aaKnown RBP8.83□□□□□ -1
TPR-208ENST00000492973 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
TPR-208ENST00000492973 CRIM1Q9NZV1 1036 aa8.83□□□□□ -1
TPR-208ENST00000492973 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
TPR-208ENST00000492973 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
TPR-208ENST00000492973 HEG1Q9ULI3 1381 aa8.83□□□□□ -1
TPR-208ENST00000492973 IL16Q14005 1332 aa8.82□□□□□ -1
TPR-208ENST00000492973 ITGB4P16144 1822 aa8.82□□□□□ -1
TPR-208ENST00000492973 SLFN14P0C7P3 912 aa8.82□□□□□ -1
TPR-208ENST00000492973 RPS26P62854 115 aaKnown RBP8.82□□□□□ -1
TPR-208ENST00000492973 GNAI1P63096 354 aa8.82□□□□□ -1
TPR-208ENST00000492973 SLFN5Q08AF3 891 aa8.82□□□□□ -1
TPR-208ENST00000492973 KRT24Q2M2I5 525 aa8.82□□□□□ -1
TPR-208ENST00000492973 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
TPR-208ENST00000492973 CLEC10AQ8IUN9 316 aa8.82□□□□□ -1
TPR-208ENST00000492973 FAM83CQ9BQN1 747 aa8.82□□□□□ -1
TPR-208ENST00000492973 C7orf69Q9H7B7 122 aa8.82□□□□□ -1
TPR-208ENST00000492973 FAM105AQ9NUU6 356 aa8.82□□□□□ -1
TPR-208ENST00000492973 STOML1Q9UBI4 398 aa8.82□□□□□ -1
TPR-208ENST00000492973 KAT6BQ8WYB5 2073 aa8.81□□□□□ -1
TPR-208ENST00000492973 PAPPAQ13219 1627 aa8.81□□□□□ -1
TPR-208ENST00000492973 SNRPA1P09661 255 aaKnown RBP8.81□□□□□ -1
TPR-208ENST00000492973 CYP19A1P11511 503 aaPredicted RBP8.81□□□□□ -1
TPR-208ENST00000492973 MAP4P27816 1152 aaKnown RBP8.81□□□□□ -1
TPR-208ENST00000492973 LIG3P49916 1009 aa8.81□□□□□ -1
TPR-208ENST00000492973 ID3Q02535 119 aa8.81□□□□□ -1
TPR-208ENST00000492973 ZC3H12AQ5D1E8 599 aaKnown RBP8.81□□□□□ -1
TPR-208ENST00000492973 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
TPR-208ENST00000492973 INTS5Q6P9B9 1019 aaKnown RBP8.81□□□□□ -1
TPR-208ENST00000492973 BEND4Q6ZU67 534 aa8.81□□□□□ -1
TPR-208ENST00000492973 DYMQ7RTS9 669 aa8.81□□□□□ -1
TPR-208ENST00000492973 AMIGO3Q86WK7 504 aa8.81□□□□□ -1
TPR-208ENST00000492973 TRIM42Q8IWZ5 723 aa8.81□□□□□ -1
TPR-208ENST00000492973 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
TPR-208ENST00000492973 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
TPR-208ENST00000492973 USP16Q9Y5T5 823 aa8.81□□□□□ -1
TPR-208ENST00000492973 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
TPR-208ENST00000492973 HMX2A2RU54 273 aa8.8□□□□□ -1
TPR-208ENST00000492973 USP11P51784 963 aa8.8□□□□□ -1
TPR-208ENST00000492973 SLC15A2Q16348 729 aa8.8□□□□□ -1
TPR-208ENST00000492973 LDLRAD1Q5T700 205 aa8.8□□□□□ -1
TPR-208ENST00000492973 DUSP27Q5VZP5 1158 aa8.8□□□□□ -1
TPR-208ENST00000492973 AGMOQ6ZNB7 445 aa8.8□□□□□ -1
TPR-208ENST00000492973 SMIM5Q71RC9 77 aa8.8□□□□□ -1
TPR-208ENST00000492973 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
TPR-208ENST00000492973 GAL3ST3Q96A11 431 aa8.8□□□□□ -1
TPR-208ENST00000492973 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
TPR-208ENST00000492973 ACSS3Q9H6R3 686 aa8.8□□□□□ -1
TPR-208ENST00000492973 STK32BQ9NY57 414 aa8.8□□□□□ -1
TPR-208ENST00000492973 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
TPR-208ENST00000492973 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
TPR-208ENST00000492973 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
TPR-208ENST00000492973 RGPD3A6NKT7 1758 aaPredicted RBP8.79□□□□□ -1
TPR-208ENST00000492973 RGPD4Q7Z3J3 1758 aa8.79□□□□□ -1
TPR-208ENST00000492973 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.79□□□□□ -1
TPR-208ENST00000492973 E9PSI1 815 aa8.79□□□□□ -1
TPR-208ENST00000492973 A1BGP04217 495 aa8.79□□□□□ -1
TPR-208ENST00000492973 RLBP1P12271 317 aa8.79□□□□□ -1
TPR-208ENST00000492973 FSTP19883 344 aa8.79□□□□□ -1
TPR-208ENST00000492973 ASPAP45381 313 aa8.79□□□□□ -1
TPR-208ENST00000492973 CRKLP46109 303 aaKnown RBP8.79□□□□□ -1
TPR-208ENST00000492973 R3HDM1Q15032 1099 aaKnown RBP8.79□□□□□ -1
TPR-208ENST00000492973 MAP3K11Q16584 847 aa8.79□□□□□ -1
TPR-208ENST00000492973 TSPYL6Q8N831 410 aa8.79□□□□□ -1
TPR-208ENST00000492973 C8orf58Q8NAV2 365 aa8.79□□□□□ -1
TPR-208ENST00000492973 FANCD2OSQ96PS1 177 aa8.79□□□□□ -1
TPR-208ENST00000492973 TEX13AQ9BXU3 409 aaPredicted RBP8.79□□□□□ -1
TPR-208ENST00000492973 BCL11AQ9H165 835 aa8.79□□□□□ -1
TPR-208ENST00000492973 DISC1Q9NRI5 854 aa8.79□□□□□ -1
TPR-208ENST00000492973 LY75O60449 1722 aa8.79□□□□□ -1
TPR-208ENST00000492973 RREB1Q92766 1687 aa8.78□□□□□ -1
TPR-208ENST00000492973 STARD3NLO95772 234 aa8.78□□□□□ -1
TPR-208ENST00000492973 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
TPR-208ENST00000492973 SLC51AQ86UW1 340 aa8.78□□□□□ -1
TPR-208ENST00000492973 PDGFDQ9GZP0 370 aaPredicted RBP8.78□□□□□ -1
TPR-208ENST00000492973 ATXN3LQ9H3M9 355 aa8.78□□□□□ -1
TPR-208ENST00000492973 ZBTB1Q9Y2K1 713 aa8.78□□□□□ -1
TPR-208ENST00000492973 NUP188Q5SRE5 1749 aa8.77□□□□□ -1
TPR-208ENST00000492973 KDM3BQ7LBC6 1761 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 UBR2Q8IWV8 1755 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 FAM95CA0A1B0GW59 222 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 ELL2O00472 640 aaPredicted RBP8.77□□□□□ -1.01
TPR-208ENST00000492973 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 HOXB7P09629 217 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
TPR-208ENST00000492973 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
TPR-208ENST00000492973 ERVK-24P63145 666 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 EXOSC9Q06265 439 aaKnown RBP8.77□□□□□ -1.01
TPR-208ENST00000492973 RNF43Q68DV7 783 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 PHC3Q8NDX5 983 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 SEMA6CQ9H3T2 930 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 MYH16Q9H6N6 1097 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms