RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 VWCEQ96DN2 955 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 MIR1-1HGQ9H1L0 117 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 CAPN10Q9HC96 672 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 SUPT16HQ9Y5B9 1047 aaKnown RBP4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 MATN3O15232 486 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 TLR3O15455 904 aaKnown RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 GDF5P43026 501 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 PCBP3P57721 371 aaKnown RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 RTP1P59025 263 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 ADAM17P78536 824 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 LAPTM5Q13571 262 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 NT5DC1Q5TFE4 455 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 GALNT18Q6P9A2 607 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 SLITRK4Q8IW52 837 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 ENOX1Q8TC92 643 aaKnown RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 JARID2Q92833 1246 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 ACSF2Q96CM8 615 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 GPRASP2Q96D09 838 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 GMLQ99445 158 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 INPP5FQ9Y2H2 1132 aa4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 POLR3KQ9Y2Y1 108 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P30-201ENST00000492455 SHISA3A0PJX4 238 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 FFAR3O14843 346 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 FGRP09769 529 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 ATF4P18848 351 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 SOX9P48436 509 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 RPL6Q02878 288 aaKnown RBP4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 MPP2Q14168 576 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 REC114Q7Z4M0 266 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 FERMT3Q86UX7 667 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 KREMEN1Q96MU8 473 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 KLHL14Q9P2G3 628 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 ZNF281Q9Y2X9 895 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 PCDHA5Q9Y5H7 936 aa4.69□□□□□ -1.66
HMGB1P30-201ENST00000492455 ADAMTS20P59510 1910 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 ROBO2Q9HCK4 1378 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 WTIPA6NIX2 430 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 NUDT19A8MXV4 375 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 IGSF3O75054 1194 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 EFEMP2O95967 443 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 PLCG1P19174 1290 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 NCKAP1LP55160 1127 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 NMIQ13287 307 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 TARBP2Q15633 366 aaKnown RBP4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 CPZQ66K79 652 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 MCF2L2Q86YR7 1114 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 SYTL5Q8TDW5 730 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 HHIPL1Q96JK4 782 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 FOXP3Q9BZS1 431 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 GINM1Q9NU53 330 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 TCFL5Q9UL49 500 aa4.68□□□□□ -1.66
HMGB1P30-201ENST00000492455 DNAJA2O60884 412 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 LIMS1P48059 325 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 CYP4F8P98187 520 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 APOBRQ0VD83 1088 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 SEZ6Q53EL9 994 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 LSRQ86X29 649 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 DAGLBQ8NCG7 672 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 NKD1Q969G9 470 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 PLCD4Q9BRC7 762 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 MENTQ9BUN1 341 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 BRMS1Q9HCU9 246 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 TNFRSF10DQ9UBN6 386 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 SUSD2Q9UGT4 822 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 EFR3BQ9Y2G0 817 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 CORINQ9Y5Q5 1042 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 PRR36Q9H6K5 1346 aa4.67□□□□□ -1.66
HMGB1P30-201ENST00000492455 FKTNO75072 461 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 ENDOUP21128 410 aaKnown RBP4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 CNR2P34972 360 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 GJA9P57773 515 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 CLCQ05315 142 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 ZC3H14Q6PJT7 736 aaKnown RBP4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 LIPIQ6XZB0 460 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 USP51Q70EK9 711 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 USHBP1Q8N6Y0 703 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 ZNF655Q8N720 491 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 CCDC74BQ96LY2 380 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 MRIQ9BWK5 157 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 FAN1Q9Y2M0 1017 aa4.66□□□□□ -1.66
HMGB1P30-201ENST00000492455 UPK3BL1B0FP48 263 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 UPK3BL2E5RIL1 263 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 C1QTNF3-AMACRE9PGA6 284 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 ATE1O95260 518 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 BPNT1O95861 308 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 ITGB3P05106 788 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 SYPP08247 313 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 C6P13671 934 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 PRKCAP17252 672 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 DNAJA1P31689 397 aaKnown RBP4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 NASPP49321 788 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 RNF4P78317 190 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 NR1I3Q14994 352 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 SLFN12Q8IYM2 578 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 PHACTR4Q8IZ21 702 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 REXO1Q8N1G1 1221 aaKnown RBP4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 LINC00116Q8NCU8 138 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 NUP43Q8NFH3 380 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 SREK1Q8WXA9 508 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms