RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
HMGN1-220ENST00000492280 ST7Q9NRC1 585 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 AKR1B15C9JRZ8 316 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-220ENST00000492280 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-220ENST00000492280 LDHCP07864 332 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 PLCG1P19174 1290 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 SLC16A2P36021 539 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 POLRMTO00411 1230 aaKnown RBP14.05□□□□□ -0.16
HMGN1-220ENST00000492280 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 L2HGDHQ9H9P8 463 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-220ENST00000492280 IL1R1P14778 569 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 ATP2B4P23634 1241 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 TXLNAP40222 546 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 UBE2SQ16763 222 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 ARHGAP29Q52LW3 1261 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 PPFIBP1Q86W92 1011 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 TBCKQ8TEA7 893 aa14.05□□□□□ -0.16
HMGN1-220ENST00000492280 KCNJ18B7U540 433 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 FCER1AP12319 257 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 TAL1P17542 331 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-220ENST00000492280 NFIAQ12857 509 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 KCNJ12Q14500 433 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 TTF2Q9UNY4 1162 aaKnown RBP14.04□□□□□ -0.16
HMGN1-220ENST00000492280 MPHOSPH10O00566 681 aaKnown RBP14.04□□□□□ -0.16
HMGN1-220ENST00000492280 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-220ENST00000492280 RGL2O15211 777 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 MFAP3LO75121 409 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 TDP2O95551 362 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 LONP1P36776 959 aaKnown RBP14.04□□□□□ -0.16
HMGN1-220ENST00000492280 TXKP42681 527 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 ZFPM1Q8IX07 1006 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 PROM2Q8N271 834 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 ZNF446Q9NWS9 450 aa14.04□□□□□ -0.16
HMGN1-220ENST00000492280 POTEMA6NI47 508 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 KIF2AO00139 706 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 STX10O60499 249 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 PBX1P40424 430 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 KCNJ6P48051 423 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 TCP10Q12799 353 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 CERKQ8TCT0 537 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 ZSCAN12O43309 604 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 SLC37A4O43826 429 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 PDHBP11177 359 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 KLK7P49862 253 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 ERVK-24P63145 666 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 ZNF658Q5TYW1 1059 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 IRF2BP1Q8IU81 584 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
HMGN1-220ENST00000492280 CGNQ9P2M7 1197 aaKnown RBP14.03□□□□□ -0.16
HMGN1-220ENST00000492280 KLRC4O43908 158 aa14.02□□□□□ -0.16
HMGN1-220ENST00000492280 GNAQP50148 359 aa14.02□□□□□ -0.16
HMGN1-220ENST00000492280 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.16
HMGN1-220ENST00000492280 ARL6IP4Q66PJ3 421 aaKnown RBP14.02□□□□□ -0.16
HMGN1-220ENST00000492280 CABP7Q86V35 215 aa14.02□□□□□ -0.16
HMGN1-220ENST00000492280 MNS1Q8NEH6 495 aa14.02□□□□□ -0.16
HMGN1-220ENST00000492280 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
HMGN1-220ENST00000492280 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 SEC31AO94979 1220 aaKnown RBP14.02□□□□□ -0.17
HMGN1-220ENST00000492280 OR52Z1P0C646 297 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 UBXN1Q04323 297 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 NONOQ15233 471 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMGN1-220ENST00000492280 TEX35Q5T0J7 233 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 TRIM47Q96LD4 638 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 TRIM10Q9UDY6 481 aa14.02□□□□□ -0.17
HMGN1-220ENST00000492280 MYO1BO43795 1136 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-220ENST00000492280 TNNI2P48788 182 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 SNAP25P60880 206 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 ASIC1P78348 528 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 STK4Q13043 487 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 FILIP1LQ4L180 1135 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 SOGA3Q5TF21 947 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 REXO1Q8N1G1 1221 aaKnown RBP14.01□□□□□ -0.17
HMGN1-220ENST00000492280 ZNF397Q8NF99 534 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-220ENST00000492280 CHP1Q99653 195 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
HMGN1-220ENST00000492280 SH3GLB2Q9NR46 395 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 TCP11L1Q9NUJ3 509 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 RWDD2AQ9UIY3 292 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 CASQ1P31415 396 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 DYMQ7RTS9 669 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 KIFC2Q96AC6 838 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms