RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TPSG1Q9NRR2 321 aa5.55□□□□□ -1.52
CLIP4-211ENST00000491701 TMEM63CQ9P1W3 806 aa5.55□□□□□ -1.52
CLIP4-211ENST00000491701 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
CLIP4-211ENST00000491701 PTPRCP08575 1304 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 COL4A1P02462 1669 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 UTRNP46939 3433 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ELOA3CA0A087WX78 387 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ELOA3DA6NLF2 546 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 J3QW42 95 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 EIF1AYO14602 144 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 IPO8O15397 1037 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 KLF4O43474 513 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 CYP2E1P05181 493 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 NBPF7P0C2Y1 421 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 EIF2AK2P19525 551 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ST13P50502 369 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 PLAURQ03405 335 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ORC1Q13415 861 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 HDAC1Q13547 482 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 RASA3Q14644 834 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ELOA3BQ3SY89 546 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 KIAA0907Q7Z7F0 614 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 SYNE4Q8N205 404 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 MICALL1Q8N3F8 863 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ANKRD44Q8N8A2 993 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ELOA3Q8NG57 546 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 JARID2Q92833 1246 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 AVENQ9NQS1 362 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ABI2Q9NYB9 513 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 TMOD3Q9NYL9 352 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 DBF4Q9UBU7 674 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 AFDNP55196 1824 aaKnown RBP5.54□□□□□ -1.52
CLIP4-211ENST00000491701 TUBGCP6Q96RT7 1819 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 TAF1P21675 1872 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 UBR3Q6ZT12 1888 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 KIF16BQ96L93 1317 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 CHD4Q14839 1912 aa5.54□□□□□ -1.52
CLIP4-211ENST00000491701 ANKRD36CQ5JPF3 1778 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CASZ1Q86V15 1759 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 LOC102724428A0A0B4J2F2 783 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 GIPC1O14908 333 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 DYRK3O43781 588 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 SH3BP5O60239 455 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 PHACTR2O75167 634 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 PPFIA4O75335 1185 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 EGFRP00533 1210 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 GHRHP01286 108 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 NEFLP07196 543 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CES1P23141 567 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 RFX5P48382 616 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 MASP1P48740 699 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 NASPP49321 788 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 SIK1P57059 783 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 ATP8B2P98198 1209 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CWF19L2Q2TBE0 894 aaKnown RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 ARTNQ5T4W7 220 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 MEI1Q5TIA1 1274 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CEP85Q6P2H3 762 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 ELMSAN1Q6PJG2 1045 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 NCAPG2Q86XI2 1143 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 HOMER1Q86YM7 354 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 DNAAF4Q8WXU2 420 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 SGSM3Q96HU1 749 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CEP89Q96ST8 783 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 METTL22Q9BUU2 404 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 DNAJC25Q9H1X3 360 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 DCTPP1Q9H773 170 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 ZFP64Q9NPA5 681 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 COPRSQ9NQ92 184 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 HYPKQ9NX55 129 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 TLR7Q9NYK1 1049 aaKnown RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 CNTN3Q9P232 1028 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 FOXD3Q9UJU5 478 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-211ENST00000491701 SLC6A14Q9UN76 642 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 ZBTB1Q9Y2K1 713 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 MAP3K2Q9Y2U5 619 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
CLIP4-211ENST00000491701 PXDNLA1KZ92 1463 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 PNMA6EA0A0J9YXQ4 647 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 POLR3DP05423 398 aaPredicted RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 MYL6BP14649 208 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 PAX3P23760 479 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 FOXO4P98177 505 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 TRIM28Q13263 835 aaKnown RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 PDE12Q6L8Q7 609 aaKnown RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 C16orf71Q8IYS4 520 aaPredicted RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 ZNF34Q8IZ26 560 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 LILRB2Q8N423 598 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 C1orf127Q8N9H9 656 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.52□□□□□ -1.53
CLIP4-211ENST00000491701 TRPM4Q8TD43 1214 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 SPON2Q9BUD6 331 aa5.52□□□□□ -1.53
CLIP4-211ENST00000491701 OSBPL7Q9BZF2 842 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms