RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 BMP8BP34820 402 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 ADCYAP1R1P41586 468 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 NOVP48745 357 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 RTP1P59025 263 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 CWC27Q6UX04 472 aaKnown RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 MFSD6Q6ZSS7 791 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 RASGRP2Q7LDG7 609 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 ZNF467Q7Z7K2 595 aaPredicted RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 TBC1D10CQ8IV04 446 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 DCAF4Q8WV16 495 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 RNF41Q9H4P4 317 aaPredicted RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 ACAD9Q9H845 621 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 TCP11L1Q9NUJ3 509 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
LSM2-213ENST00000491421 ATP11BQ9Y2G3 1177 aa9.75□□□□□ -0.85
LSM2-213ENST00000491421 DNAH12Q6ZR08 3092 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 SNAI1O95863 264 aaPredicted RBP9.74□□□□□ -0.85
LSM2-213ENST00000491421 PGK1P00558 417 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 TOP1P11387 765 aaKnown RBP9.74□□□□□ -0.85
LSM2-213ENST00000491421 ALAS1P13196 640 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 SNAP25P60880 206 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 TKFCQ3LXA3 575 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 MAMDC4Q6UXC1 1216 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 SLC39A5Q6ZMH5 540 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 RNF180Q86T96 592 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 FERMT2Q96AC1 680 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
LSM2-213ENST00000491421 TMEM47Q9BQJ4 181 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 UBE2OQ9C0C9 1292 aaKnown RBP9.74□□□□□ -0.85
LSM2-213ENST00000491421 PRKAG2Q9UGJ0 569 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 FAM184BQ9ULE4 1060 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 PRR12Q9ULL5 1215 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 ZNF536O15090 1300 aa9.74□□□□□ -0.85
LSM2-213ENST00000491421 COL11A1P12107 1806 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 SZT2Q5T011 3432 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 ZNF213O14771 459 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 SLC16A2P36021 539 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 CNTN2Q02246 1040 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 ESR2Q92731 530 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 FGD4Q96M96 766 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 LBHD1Q9BQE6 289 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 A1CFQ9NQ94 594 aaKnown RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 CCPG1Q9ULG6 757 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 PHF24Q9UPV7 400 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 ALPK3Q96L96 1907 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 NEDD4P46934 1319 aa9.73□□□□□ -0.85
LSM2-213ENST00000491421 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
LSM2-213ENST00000491421 SOX1O00570 391 aaPredicted RBP9.72□□□□□ -0.85
LSM2-213ENST00000491421 ADAMTS4O75173 837 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 ICAM1P05362 532 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 SNX17Q15036 470 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 MUM1L1Q5H9M0 696 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 SYDE2Q5VT97 1194 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 TTBK2Q6IQ55 1244 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 TDHQ8IZJ6 230 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 FAM133AQ8N9E0 248 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 TTC14Q96N46 770 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 DSCC1Q9BVC3 393 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 ABHD16BQ9H3Z7 469 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 GPCPD1Q9NPB8 672 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
LSM2-213ENST00000491421 SYNRGQ9UMZ2 1314 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 FRMPD3Q5JV73 1810 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
LSM2-213ENST00000491421 A0A1W2PQ45 241 aaPredicted RBP9.71□□□□□ -0.86
LSM2-213ENST00000491421 A0A1W2PQY0 241 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 SOWAHBA6NEL2 793 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 ASB14A6NK59 587 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 KDM4AO75164 1064 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 DUSP11O75319 330 aaKnown RBP9.71□□□□□ -0.86
LSM2-213ENST00000491421 PDHBP11177 359 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 PDE4AP27815 886 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 NT5C2P49902 561 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 IMMTQ16891 758 aaKnown RBP9.71□□□□□ -0.86
LSM2-213ENST00000491421 CCDC144BQ3MJ40 725 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 CCDC178Q5BJE1 867 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 TTC22Q5TAA0 569 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 C1orf53Q5VUE5 145 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 NSMFQ6X4W1 530 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 ZKSCAN3Q9BRR0 538 aa9.71□□□□□ -0.86
LSM2-213ENST00000491421 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
LSM2-213ENST00000491421 RANBP17Q9H2T7 1088 aaKnown RBP9.71□□□□□ -0.86
LSM2-213ENST00000491421 SPC25Q9HBM1 224 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms