RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ADCY6O43306 1168 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 PLA2G6O60733 806 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 TTLL1O95922 423 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 FOSL2P15408 326 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 DNAJB2P25686 324 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CCDC174Q6PII3 467 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 C16orf59Q7L2K0 433 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 FAM133AQ8N9E0 248 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 SLC43A3Q8NBI5 491 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 NEDD1Q8NHV4 660 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CRBNQ96SW2 442 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 SEZ6LQ9BYH1 1024 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 SPC25Q9HBM1 224 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CLIP2Q9UDT6 1046 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZHX1Q9UKY1 873 aaPredicted RBP10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 EYSQ5T1H1 3165 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 CHD9Q3L8U1 2897 aa10.08□□□□□ -0.8
APOBEC3F-204ENST00000491387 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 MINDY4BA8MYZ0 360 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 ARVCFO00192 962 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 GPAA1O43292 621 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 RAD21O60216 631 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 CD4P01730 458 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 ASGR1P07306 291 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 PPIGQ13427 754 aaKnown RBP eCLIP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 LRRFIP1Q32MZ4 808 aaKnown RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 TKFCQ3LXA3 575 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 CCDC144BQ3MJ40 725 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 TMEM240Q5SV17 173 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 FAM126BQ8IXS8 530 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 IFNL3Q8IZI9 196 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZNF444Q8N0Y2 327 aaPredicted RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 ANKRD35Q8N283 1001 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 GPATCH3Q96I76 525 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 RAVER2Q9HCJ3 691 aaKnown RBP10.07□□□□□ -0.8
APOBEC3F-204ENST00000491387 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 CABYRO75952 493 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 BMP3P12645 472 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 CPXCR1Q8N123 301 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 TMEM199Q8N511 208 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZNF576Q9H609 170 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 GNEQ9Y223 722 aaKnown RBP10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 Q9Y3F1 56 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZNF536O15090 1300 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
APOBEC3F-204ENST00000491387 LRRC37A2A6NM11 1700 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 ASB14A6NK59 587 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 M0R2C6 588 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 TLR3O15455 904 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 NOVP48745 357 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 TDO2P48775 406 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 STAT2P52630 851 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 CNTN2Q02246 1040 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 PDE4BQ07343 736 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 AKNAD1Q5T1N1 836 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 PSRC1Q6PGN9 363 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 MORC4Q8TE76 937 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 STAG1Q8WVM7 1258 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 NACAP1Q9BZK3 213 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 A1CFQ9NQ94 594 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 CTDP1Q9Y5B0 961 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 ASTN1O14525 1302 aa10.05□□□□□ -0.8
APOBEC3F-204ENST00000491387 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 TMEM232C9JQI7 657 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 PRDM1O75626 825 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 TSPY3P0CV98 308 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 TSPY8P0CW00 308 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 CSF2RAP15509 400 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 TJAP1Q5JTD0 557 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 IQSEC1Q6DN90 963 aa10.04□□□□□ -0.8
APOBEC3F-204ENST00000491387 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms