RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 HEATR6Q6AI08 1181 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 CCDC81Q6ZN84 652 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 TMC6Q7Z403 805 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 TMEM192Q8IY95 271 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 C7orf61Q8IZ16 206 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 EAF1Q96JC9 268 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 HHIPL1Q96JK4 782 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ZDHHC15Q96MV8 337 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 SLC9A7Q96T83 725 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 HDAC8Q9BY41 377 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 NOL6Q9H6R4 1146 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 EBF1Q9UH73 591 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 PPT2Q9UMR5 302 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 CLIP1P30622 1438 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 BAZ1BQ9UIG0 1483 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ABCC8Q09428 1581 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 MYOCOSA0A1B0GUC4 107 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 F8W031 263 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 CCER2I3L3R5 266 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 NRDCO43847 1150 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 SEMA7AO75326 666 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 PPM1BO75688 479 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 PFKLP17858 780 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 PI3P19957 117 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 VIPR1P32241 457 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 EIF6P56537 245 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 KIR3DS1Q14943 382 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 DPY19L1Q2PZI1 675 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 DCAF15Q66K64 600 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 CNKSR3Q6P9H4 555 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 CRTC3Q6UUV7 619 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 RUFY4Q6ZNE9 571 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 CABP7Q86V35 215 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF654Q8IZM8 581 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 FIBCD1Q8N539 461 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 ADCY4Q8NFM4 1077 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 PANK1Q8TE04 598 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 LINC01599Q8WXQ3 324 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 FCRL2Q96LA5 508 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 SIGLEC10Q96LC7 697 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 YTHDC1Q96MU7 727 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 CRTAC1Q9NQ79 661 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 BTG4Q9NY30 223 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 LRP2BPQ9P2M1 347 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 SUCOQ9UBS9 1254 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 EFR3BQ9Y2G0 817 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 TTBK1Q5TCY1 1321 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 VPS8Q8N3P4 1428 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 PEG3Q9GZU2 1588 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 KIF21BO75037 1637 aa2.82□□□□□ -1.96
SNRNP40-207ENST00000491106 A0A1W2PQ45 241 aaPredicted RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 A0A1W2PQY0 241 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 B8ZZF3 427 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 C9IYK1 514 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 BUB1BO60566 1050 aaPredicted RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 VAMP4O75379 141 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 TACR1P25103 407 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 BMP8BP34820 402 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 SEPHS1P49903 392 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 AFF3P51826 1226 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 HSF5Q4G112 596 aaPredicted RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 INTS3Q68E01 1043 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 UNC5AQ6ZN44 842 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 LCNL1Q6ZST4 164 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 NLRX1Q86UT6 975 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 VPS37DQ86XT2 251 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 SLITRK4Q8IW52 837 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 NLGN1Q8N2Q7 840 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 RELTQ969Z4 430 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 VWCEQ96DN2 955 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 FGD4Q96M96 766 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 PWWP2AQ96N64 755 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 TM9SF2Q99805 663 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 PLCD4Q9BRC7 762 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 LRRC3Q9BY71 257 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 GBP3Q9H0R5 595 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 IMPACTQ9P2X3 320 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 PPP1R1BQ9UD71 204 aaPredicted RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 PCDHB10Q9UN67 800 aa2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 DIS3Q9Y2L1 958 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 EIF4G1Q04637 1599 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-207ENST00000491106 ARID1BQ8NFD5 2236 aaPredicted RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 TMEM82A0PJX8 343 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 FADS2P1A8MWK0 482 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 H0Y8X5 98 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 NOP56O00567 594 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 SCAMP3O14828 347 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 N4BP3O15049 544 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 CD247P20963 164 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 GUCY2CP25092 1073 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 PMS1P54277 932 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF445P59923 1031 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 SLC7A5Q01650 507 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 PAK2Q13177 524 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 MRPL58Q14197 206 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 NR1I3Q14994 352 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 TARBP2Q15633 366 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 AXDND1Q5T1B0 1012 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms