RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MINDY4BA8MYZ0 360 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 ARVCFO00192 962 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 TLR3O15455 904 aaKnown RBP24.67■■□□□ 1.54
CLIP2-208ENST00000491075 RASIP1Q5U651 963 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 PSRC1Q6PGN9 363 aaPredicted RBP24.67■■□□□ 1.54
CLIP2-208ENST00000491075 ARMCX2Q7L311 632 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 STK11IPQ8N1F8 1099 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 FGD4Q96M96 766 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 GAS2L1Q99501 681 aaPredicted RBP24.67■■□□□ 1.54
CLIP2-208ENST00000491075 ZNF287Q9HBT7 754 aa24.67■■□□□ 1.54
CLIP2-208ENST00000491075 CSF2RAP15509 400 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 IRX5P78411 483 aaPredicted RBP24.66■■□□□ 1.54
CLIP2-208ENST00000491075 GNASQ5JWF2 1037 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 CCDC129Q6ZRS4 1044 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 C16orf59Q7L2K0 433 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 FAM126BQ8IXS8 530 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 PBX4Q9BYU1 374 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 LRRC37A2A6NM11 1700 aa24.66■■□□□ 1.54
CLIP2-208ENST00000491075 GBF1Q92538 1859 aa24.65■■□□□ 1.54
CLIP2-208ENST00000491075 APPBP2Q92624 585 aa24.65■■□□□ 1.54
CLIP2-208ENST00000491075 MKL1Q969V6 931 aa24.65■■□□□ 1.54
CLIP2-208ENST00000491075 FDX1P10109 184 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 NKX3-2P78367 333 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 CCDC144CPQ8IYA2 1237 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 ZNF444Q8N0Y2 327 aaPredicted RBP24.64■■□□□ 1.54
CLIP2-208ENST00000491075 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 GMCL1P1Q8NEA9 526 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 CEP95Q96GE4 821 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 PPP1R12CQ9BZL4 782 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 ECHDC1Q9NTX5 307 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 MTMR4Q9NYA4 1195 aa24.64■■□□□ 1.54
CLIP2-208ENST00000491075 MYO9BQ13459 2157 aa24.64■■□□□ 1.53
CLIP2-208ENST00000491075 TTLL1O95922 423 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 GNAT2P19087 354 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 PBX2P40425 430 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 TDO2P48775 406 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 AKNAD1Q5T1N1 836 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 ZNF365Q70YC5 407 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 OSBP2Q969R2 916 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 KATNBL1Q9H079 304 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 EPB41L4AQ9HCS5 686 aaPredicted RBP24.63■■□□□ 1.53
CLIP2-208ENST00000491075 PLIN4Q96Q06 1357 aa24.63■■□□□ 1.53
CLIP2-208ENST00000491075 GRXCR1A8MXD5 290 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 TNFRSF10AO00220 468 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 CTAGE5O15320 804 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 LRRC47Q8N1G4 583 aaKnown RBP24.62■■□□□ 1.53
CLIP2-208ENST00000491075 MTIF3Q9H2K0 278 aaKnown RBP24.62■■□□□ 1.53
CLIP2-208ENST00000491075 ACAD9Q9H845 621 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 HOMER2Q9NSB8 354 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 CHD7Q9P2D1 2997 aa24.62■■□□□ 1.53
CLIP2-208ENST00000491075 GPAA1O43292 621 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 SMARCA5O60264 1052 aaPredicted RBP24.61■■□□□ 1.53
CLIP2-208ENST00000491075 CD4P01730 458 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 ZFYP08048 801 aaPredicted RBP24.61■■□□□ 1.53
CLIP2-208ENST00000491075 ACRP10323 421 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 RAB30Q15771 203 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 FAM133AQ8N9E0 248 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 ATXN2LQ8WWM7 1075 aaKnown RBP24.61■■□□□ 1.53
CLIP2-208ENST00000491075 GPATCH3Q96I76 525 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 PRDM12Q9H4Q4 367 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 IL23AQ9NPF7 189 aa24.61■■□□□ 1.53
CLIP2-208ENST00000491075 PRDM1O75626 825 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 CABYRO75952 493 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 BMP3P12645 472 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 STAT2P52630 851 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 TNFAIP2Q03169 654 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 HERVK_113Q902F9 699 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 THEGQ9P2T0 379 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 MSRAQ9UJ68 235 aa24.6■■□□□ 1.53
CLIP2-208ENST00000491075 RNF113AO15541 343 aaKnown RBP24.59■■□□□ 1.53
CLIP2-208ENST00000491075 CYP2C18P33260 490 aa24.59■■□□□ 1.53
CLIP2-208ENST00000491075 BEX3Q00994 111 aa24.59■■□□□ 1.53
CLIP2-208ENST00000491075 CNTN2Q02246 1040 aa24.59■■□□□ 1.53
CLIP2-208ENST00000491075 SLFN13Q68D06 897 aa24.59■■□□□ 1.53
CLIP2-208ENST00000491075 SLC43A3Q8NBI5 491 aa24.59■■□□□ 1.53
CLIP2-208ENST00000491075 ASB14A6NK59 587 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 APPP05067 770 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 NOL8Q76FK4 1167 aaKnown RBP24.58■■□□□ 1.53
CLIP2-208ENST00000491075 TLK2Q86UE8 772 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 FAM160B2Q86V87 743 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 PPM1EQ8WY54 764 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 SEZ6LQ9BYH1 1024 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 HIPK3Q9H422 1215 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 A1CFQ9NQ94 594 aaKnown RBP24.58■■□□□ 1.53
CLIP2-208ENST00000491075 RNF146Q9NTX7 359 aa24.58■■□□□ 1.53
CLIP2-208ENST00000491075 ISY1Q9ULR0 285 aaKnown RBP24.58■■□□□ 1.53
CLIP2-208ENST00000491075 ASTN1O14525 1302 aa24.58■■□□□ 1.52
CLIP2-208ENST00000491075 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.57■■□□□ 1.52
CLIP2-208ENST00000491075 TMEM232C9JQI7 657 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 TSPY3P0CV98 308 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 TSPY8P0CW00 308 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 TKFCQ3LXA3 575 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 CXCL17Q6UXB2 119 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 NEDD1Q8NHV4 660 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 CHURC1Q8WUH1 139 aa24.57■■□□□ 1.52
CLIP2-208ENST00000491075 GNEQ9Y223 722 aaKnown RBP24.57■■□□□ 1.52
CLIP2-208ENST00000491075 M0R2C6 588 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 FGBP02675 491 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 PDE4BQ07343 736 aa24.56■■□□□ 1.52
CLIP2-208ENST00000491075 FSCN1Q16658 493 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms