RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 CCDC93Q567U6 631 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 IFIT1BQ5T764 474 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 TSHZ3Q63HK5 1081 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 OVOS1Q6IE37 1185 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ZCCHC8Q6NZY4 707 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 CC2D1AQ6P1N0 951 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 PGM2L1Q6PCE3 622 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 FKBP9P1Q75LS8 142 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ADAT2Q7Z6V5 191 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 TPH2Q8IWU9 490 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 MICALL1Q8N3F8 863 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 NKAPQ8N5F7 415 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 BVESQ8NE79 360 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 IL17REQ8NFR9 667 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ENOX1Q8TC92 643 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 RPGRQ92834 1020 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 HPS1Q92902 700 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ELMO3Q96BJ8 720 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 TIFAQ96CG3 184 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 GCC1Q96CN9 775 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 RCC1LQ96I51 464 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 CCDC138Q96M89 665 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ZFYVE21Q9BQ24 234 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 LSM14BQ9BX40 385 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 PBX4Q9BYU1 374 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 MYLK2Q9H1R3 596 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ZNF395Q9H8N7 513 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 AGO4Q9HCK5 861 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 TIMMDC1Q9NPL8 285 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 HELLSQ9NRZ9 838 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 TOR4AQ9NXH8 423 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 CLIC5Q9NZA1 410 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 REV1Q9UBZ9 1251 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 FAM50BQ9Y247 325 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 INVSQ9Y283 1065 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 POLR3KQ9Y2Y1 108 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 LTBP3Q9NS15 1303 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 A0A1W2PRQ8 180 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 DYTNA2CJ06 578 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 FAM187AA6NFU0 413 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 TRIM75PA6NK02 468 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 SPDYE3A6NKU9 549 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 FAM227AF5H4B4 570 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 APAF1O14727 1248 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 NBNO60934 754 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 CYP2E1P05181 493 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 GSTP1P09211 210 aaKnown RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 FAM157BP0CG42 384 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 RHCEP18577 417 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 HOXC12P31275 282 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 KPNA1P52294 538 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 RHDQ02161 417 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 ZNF252P-AS1Q0IIN9 211 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 PCBP1Q15365 356 aaKnown RBP eCLIP3.27□□□□□ -1.89
EPB41-212ENST00000490308 SPRED3Q2MJR0 410 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 WIPI1Q5MNZ9 446 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 INTS11Q5TA45 600 aaKnown RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 PIK3R6Q5UE93 754 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 FOXB2Q5VYV0 432 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 CFAP161Q6P656 301 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 DARS2Q6PI48 645 aaKnown RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 EPM2AIP1Q7L775 607 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 RASSF3Q86WH2 238 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 MIER2Q8N344 545 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 KDF1Q8NAX2 398 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 DEPTORQ8TB45 409 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 DCAF4Q8WV16 495 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 KLHL6Q8WZ60 621 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 GAL3ST3Q96A11 431 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 FAXDC2Q96IV6 333 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 HHIPQ96QV1 700 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 GSX2Q9BZM3 304 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.27□□□□□ -1.89
EPB41-212ENST00000490308 MTFR1LQ9H019 292 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 NUP62CLQ9H1M0 184 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 SOX17Q9H6I2 414 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 SLC52A2Q9HAB3 445 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 POLMQ9NP87 494 aaPredicted RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 WHRNQ9P202 907 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 HDAC9Q9UKV0 1011 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 PADI4Q9UM07 663 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 PCDHA4Q9UN74 947 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 TMEM98Q9Y2Y6 226 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 AFG3L2Q9Y4W6 797 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 NUB1Q9Y5A7 615 aa3.27□□□□□ -1.89
EPB41-212ENST00000490308 LRRFIP2Q9Y608 721 aaKnown RBP3.27□□□□□ -1.89
EPB41-212ENST00000490308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.26□□□□□ -1.89
EPB41-212ENST00000490308 TCRBV16S1A1N1A0A5B0 115 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 J3KRW8 73 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 PRPF3O43395 683 aaKnown RBP3.26□□□□□ -1.89
EPB41-212ENST00000490308 MGEA5O60502 916 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 CLEC3AO75596 197 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 PRKD3O94806 890 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 ITGAVP06756 1048 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 ASGR2P07307 311 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 HNRNPCP07910 306 aaKnown RBP eCLIP3.26□□□□□ -1.89
EPB41-212ENST00000490308 ITGA4P13612 1032 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 ATP4AP20648 1035 aa3.26□□□□□ -1.89
EPB41-212ENST00000490308 TARSP26639 723 aaKnown RBP3.26□□□□□ -1.89
EPB41-212ENST00000490308 MSX1P28360 303 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms