RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 VCAM1P19320 739 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 ADCY7P51828 1080 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 NR5A1Q13285 461 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 LDLRAD1Q5T700 205 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 TYW1BQ6NUM6 668 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 TNFRSF25Q93038 417 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 COA7Q96BR5 231 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 SLF1Q9BQI6 1058 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 RANBP17Q9H2T7 1088 aaKnown RBP15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 ELP3Q9H9T3 547 aa15.2■□□□□ 0.02
HLA-DOA-205ENST00000490305 PTPRFP10586 1907 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 CXCL11O14625 94 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PPP1R11O60927 126 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 TRAPPC10P48553 1259 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 HMGCS2P54868 508 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PPIL2Q13356 520 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 ANO1Q5XXA6 986 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 MCTP2Q6DN12 878 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 ZNF526Q8TF50 670 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 LEO1Q8WVC0 666 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 ZNF408Q9H9D4 720 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 RIC8AQ9NPQ8 531 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 RCOR1Q9UKL0 485 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PCDHA6Q9UN73 950 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 CEP131Q9UPN4 1083 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PCDHA8Q9Y5H6 950 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PCDHA1Q9Y5I3 950 aa15.19■□□□□ 0.02
HLA-DOA-205ENST00000490305 PARP14Q460N5 1801 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 M0R2N6 131 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 TRAF5O00463 557 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 FLOT1O75955 427 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 MBD3O95983 291 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 NASPP49321 788 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 UBE2HP62256 183 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 MOB2Q70IA6 237 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 KRT25Q7Z3Z0 450 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 CUL5Q93034 780 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L15C9J2P7 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L13C9JLJ4 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L11C9JVI0 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L18D6R9N7 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L22D6RA61 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L17D6RBQ6 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L19D6RCP7 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L20D6RJB6 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 TRAK2O60296 914 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 ZBED4O75132 1171 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 BMP15O95972 392 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 CEBPZQ03701 1054 aaKnown RBP15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 USP17L24Q0WX57 530 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 STK38Q15208 465 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 LINC00301Q8NCQ3 95 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 SLC10A4Q96EP9 437 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 OTUD5Q96G74 571 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 KCNH4Q9UQ05 1017 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 ABCB11O95342 1321 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
HLA-DOA-205ENST00000490305 LOC285556D6RIA3 1793 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 GOLGA6L4A6NEF3 574 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 SNAP25P60880 206 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 COG2Q14746 738 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 OPTNQ96CV9 577 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 CLMNQ96JQ2 1002 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 FBXO28Q9NVF7 368 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 MRPL11Q9Y3B7 192 aaKnown RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
HLA-DOA-205ENST00000490305 IRF6O14896 467 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 SPTLC2O15270 562 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 PPP6R2O75170 966 aa15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 CELF2O95319 508 aaKnown RBP15.15■□□□□ 0.02
HLA-DOA-205ENST00000490305 ICAM1P05362 532 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms