RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 REV1Q9UBZ9 1251 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 L1RE1Q9UN81 338 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 GOLGA8CPA6NN73 597 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 MEN1O00255 615 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ATXN7O15265 892 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TLR5O60602 858 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PSAPP07602 524 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 CTSBP07858 339 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 MAPTP10636 758 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 NAT1P18440 290 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TARSP26639 723 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 INPP5AQ14642 412 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF827Q17R98 1081 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PGBD4Q96DM1 585 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 CELF4Q9BZC1 486 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TMEM8AQ9HCN3 771 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 CLIC5Q9NZA1 410 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PASKQ96RG2 1323 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 AREL1O15033 823 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PIP5K1CO60331 668 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SDHAP31040 664 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 GRIA2P42262 883 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TBX2Q13207 712 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TERF2Q15554 542 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ELF2Q15723 593 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 GPBAR1Q8TDU6 330 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 CCDC86Q9H6F5 360 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 RC3H2Q9HBD1 1191 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 TIMMDC1Q9NPL8 285 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 NLRC4Q9NPP4 1024 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ATXN7L1Q9ULK2 861 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SLC19A1P41440 591 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 ADCYAP1R1P41586 468 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 NEK10Q6ZWH5 1172 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 DCAF4Q8WV16 495 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 MSLNLQ96KJ4 702 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 TREX2Q9BQ50 279 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 YIPF4Q9BSR8 244 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 SUGCTQ9HAC7 445 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 PDLIM7Q9NR12 457 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 KANSL3Q9P2N6 904 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 STARD13Q9Y3M8 1113 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF451Q9Y4E5 1061 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 DDX58O95786 925 aaKnown RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 E4F1Q66K89 784 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 Q6ZS46 218 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 BRAPQ7Z569 592 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 HPS3Q969F9 1004 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 EID2BQ96D98 161 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 PPM1MQ96MI6 270 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 PFDN2Q9UHV9 154 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF180Q9UJW8 692 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 ASXL2Q76L83 1435 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 APAF1O14727 1248 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 TBX1O43435 398 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 CST3P01034 146 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 BCRP11274 1271 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 CASP5P51878 434 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 GPR85P60893 370 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 PIP4K2BP78356 416 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 NBPF12Q5TAG4 269 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 TANGO2Q6ICL3 276 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 OVCH2Q7RTZ1 564 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 TEX19Q8NA77 164 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 KCTD12Q96CX2 325 aaKnown RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 MMP19Q99542 508 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 TMPRSS13Q9BYE2 586 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 OSBPL5Q9H0X9 879 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 LUC7LQ9NQ29 371 aaKnown RBP3.79□□□□□ -1.8
UBXN4-208ENST00000490163 AKAP2Q9Y2D5 859 aa3.79□□□□□ -1.8
UBXN4-208ENST00000490163 METTL12A8MUP2 240 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 EYA2O00167 538 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 FOSP01100 380 aaPredicted RBP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF865P0CJ78 1059 aaPredicted RBP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 ATP11AP98196 1134 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 MYBPC2Q14324 1141 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 KIAA1211LQ6NV74 962 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 SEZ6L2Q6UXD5 910 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 USP33Q8TEY7 942 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 PLCB1Q9NQ66 1216 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 CRIM1Q9NZV1 1036 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 WHRNQ9P202 907 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 BAZ1BQ9UIG0 1483 aaKnown RBP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 J3QL48 77 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 FANCGO15287 622 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 SH3BP5O60239 455 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 SRFP11831 508 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 HALP42357 657 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 SAFBQ15424 915 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 DBN1Q16643 649 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 LARP1BQ659C4 914 aaKnown RBP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 MPRIPQ6WCQ1 1025 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 TRIM46Q7Z4K8 759 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 DPP9Q86TI2 863 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 FAM9AQ8IZU1 332 aaPredicted RBP3.78□□□□□ -1.8
UBXN4-208ENST00000490163 TMEM87BQ96K49 555 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 DHRS1Q96LJ7 313 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 TTC1Q99614 292 aa3.78□□□□□ -1.8
UBXN4-208ENST00000490163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms