RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 CCSER1Q9C0I3 900 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 TSPYL1Q9H0U9 437 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 RIOX1Q9H6W3 641 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 IGSF5Q9NSI5 407 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 FOCADQ5VW36 1801 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 QSER1Q2KHR3 1735 aa10□□□□□ -0.81
CSMD2-209ENST00000489419 AFMP43652 599 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 FKBP1AP62942 108 aaKnown RBP9.99□□□□□ -0.81
CSMD2-209ENST00000489419 NR1I3Q14994 352 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 HEATR3Q7Z4Q2 680 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 CEP95Q96GE4 821 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 MASTLQ96GX5 879 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 CUEDC2Q9H467 287 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 MAGEF1Q9HAY2 307 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
CSMD2-209ENST00000489419 CEP83Q9Y592 693 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 MYH1P12882 1939 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 BRWD3Q6RI45 1802 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 SPECC1LQ69YQ0 1117 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 DPP8Q6V1X1 898 aaPredicted RBP9.99□□□□□ -0.81
CSMD2-209ENST00000489419 RNF217Q8TC41 542 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 MED15Q96RN5 788 aa9.99□□□□□ -0.81
CSMD2-209ENST00000489419 A0A1B0GTH6 734 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 SNHG28P0DPA3 235 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 CAPN2P17655 700 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 SOGA3Q5TF21 947 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 CDKAL1Q5VV42 579 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 E4F1Q66K89 784 aaPredicted RBP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 INTS13Q9NVM9 706 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 ANKRD31Q8N7Z5 1873 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 ADAMTS3O15072 1205 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 NAPAP54920 295 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 HDLBPQ00341 1268 aaKnown RBP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 NONOQ15233 471 aaKnown RBP eCLIP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 ZNF827Q17R98 1081 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 ZNF658Q5TYW1 1059 aaPredicted RBP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 KIF18AQ8NI77 898 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 SERPINB13Q9UIV8 391 aa9.98□□□□□ -0.81
CSMD2-209ENST00000489419 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
CSMD2-209ENST00000489419 SMCO2A6NFE2 343 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 LRRC10BA6NIK2 292 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 ARHGAP6O43182 974 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 STX10O60499 249 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 PDHBP11177 359 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 CBX1P83916 185 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 SPAG1Q07617 926 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 KCNB1Q14721 858 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 INF2Q27J81 1249 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 FILIP1LQ4L180 1135 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 CERS5Q8N5B7 392 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 TEKT1Q969V4 418 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 CCDC17Q96LX7 622 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 EHD4Q9H223 541 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
CSMD2-209ENST00000489419 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 ZSCAN12O43309 604 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 TTLL1O95922 423 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 HLA-DOAP06340 250 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
CSMD2-209ENST00000489419 UBA7P41226 1012 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 STAT6P42226 847 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 RRAGBQ5VZM2 374 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
CSMD2-209ENST00000489419 MYCBPQ99417 103 aaPredicted RBP9.97□□□□□ -0.81
CSMD2-209ENST00000489419 SAMSN1Q9NSI8 373 aaKnown RBP9.97□□□□□ -0.81
CSMD2-209ENST00000489419 GOLGA6L9A6NEM1 432 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 TMEM232C9JQI7 657 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 G3V3G9 751 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 RPN1P04843 607 aaKnown RBP9.96□□□□□ -0.81
CSMD2-209ENST00000489419 GOLGA8HP0CJ92 632 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 STYK1Q6J9G0 422 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 APTXQ7Z2E3 356 aaKnown RBP9.96□□□□□ -0.81
CSMD2-209ENST00000489419 NEK8Q86SG6 692 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.81
CSMD2-209ENST00000489419 OTUD6BQ8N6M0 293 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 RASGRP4Q8TDF6 673 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 MTRQ99707 1265 aa9.96□□□□□ -0.81
CSMD2-209ENST00000489419 TRMT1Q9NXH9 659 aaKnown RBP9.96□□□□□ -0.81
CSMD2-209ENST00000489419 ADD3Q9UEY8 706 aaKnown RBP9.96□□□□□ -0.81
CSMD2-209ENST00000489419 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 OR52Z1P0C646 297 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 HOXA7P31268 230 aaPredicted RBP9.96□□□□□ -0.82
CSMD2-209ENST00000489419 GPATCH4Q5T3I0 446 aaKnown RBP9.96□□□□□ -0.82
CSMD2-209ENST00000489419 ZNF772Q68DY9 489 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms