RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RANBP17Q9H2T7 1088 aaKnown RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 RIOX1Q9H6W3 641 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 V9GY48 417 aaPredicted RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 STK36Q9NRP7 1315 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 VWA5AO00534 786 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 PLS1Q14651 629 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 USH1GQ495M9 461 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 HEATR3Q7Z4Q2 680 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 CPXCR1Q8N123 301 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
TRAIP-209ENST00000488860 ZCCHC17Q9NP64 241 aaKnown RBP14.25□□□□□ -0.13
TRAIP-209ENST00000488860 HOXC10Q9NYD6 342 aa14.25□□□□□ -0.13
TRAIP-209ENST00000488860 ZBTB5O15062 677 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
TRAIP-209ENST00000488860 PEX10O60683 326 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 DEXIO95424 95 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 GJB2P29033 226 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 TM4SF4P48230 202 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
TRAIP-209ENST00000488860 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
TRAIP-209ENST00000488860 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 SLC38A10Q9HBR0 1119 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 RAVER2Q9HCJ3 691 aaKnown RBP14.24□□□□□ -0.13
TRAIP-209ENST00000488860 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
TRAIP-209ENST00000488860 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 ZSWIM8A7E2V4 1837 aa14.24□□□□□ -0.13
TRAIP-209ENST00000488860 PNMA6FA0A0J9YX94 578 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-209ENST00000488860 FDX1P10109 184 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 SCG2P13521 617 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 MAP2K2P36507 400 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 PFKFB3Q16875 520 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-209ENST00000488860 SNRNP48Q6IEG0 339 aaKnown RBP14.23□□□□□ -0.13
TRAIP-209ENST00000488860 FBXO11Q86XK2 927 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 ANKRD13CQ8N6S4 541 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 GTF3C2Q8WUA4 911 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-209ENST00000488860 WASF1Q92558 559 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 MTMR8Q96EF0 704 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 AIFM3Q96NN9 605 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 ALG1Q9BT22 464 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 ZFYVE28Q9HCC9 887 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 BTBD7Q9P203 1132 aa14.23□□□□□ -0.13
TRAIP-209ENST00000488860 ZNFX1Q9P2E3 1918 aaKnown RBP14.23□□□□□ -0.13
TRAIP-209ENST00000488860 MYH15Q9Y2K3 1946 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 ALDH1A1P00352 501 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 FDPSP14324 419 aaKnown RBP14.22□□□□□ -0.13
TRAIP-209ENST00000488860 CRHR2Q13324 411 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 TMEM132BQ14DG7 1078 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 PKN1Q16512 942 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 LBX2Q6XYB7 198 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 COA7Q96BR5 231 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 INTS4Q96HW7 963 aaKnown RBP14.22□□□□□ -0.13
TRAIP-209ENST00000488860 AGBL1Q96MI9 1066 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 AMNQ9BXJ7 453 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 HOMER2Q9NSB8 354 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 VPS54Q9P1Q0 977 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 CPA4Q9UI42 421 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 KIF3AQ9Y496 699 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 PLXNA1Q9UIW2 1896 aa14.22□□□□□ -0.13
TRAIP-209ENST00000488860 ZNF536O15090 1300 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 CNMDO75829 334 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 ICAM1P05362 532 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 ALAS1P13196 640 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
TRAIP-209ENST00000488860 NAPAP54920 295 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 POTEEQ6S8J3 1075 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 TEX13BQ9BXU2 312 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 ZNF214Q9UL59 606 aaPredicted RBP14.21□□□□□ -0.13
TRAIP-209ENST00000488860 ADAMTS5Q9UNA0 930 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 PCDHA1Q9Y5I3 950 aa14.21□□□□□ -0.13
TRAIP-209ENST00000488860 LCTP09848 1927 aa14.21□□□□□ -0.14
TRAIP-209ENST00000488860 ABCB11O95342 1321 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 STXBP3O00186 592 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 CA12O43570 354 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
TRAIP-209ENST00000488860 XBP1P17861 261 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 STAT3P40763 770 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 OAZ1P54368 228 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 ERVK-24P63145 666 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 TRIM29Q14134 588 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
TRAIP-209ENST00000488860 BARHL2Q9NY43 387 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
TRAIP-209ENST00000488860 hCG_1984214I3L0E3 225 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 TLR2O60603 784 aa14.19□□□□□ -0.14
TRAIP-209ENST00000488860 TRPA1O75762 1119 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms