RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 CPVLQ9H3G5 476 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 VAT1LQ9HCJ6 419 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 DHX16O60231 1041 aaKnown RBP15.45■□□□□ 0.06
COL4A6-207ENST00000487645 FKTNO75072 461 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 PLEKHA8P1O95397 391 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 ICAM1P05362 532 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 COPB2P35606 906 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 CCT2P78371 535 aaKnown RBP15.45■□□□□ 0.06
COL4A6-207ENST00000487645 TRAF1Q13077 416 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 PLS1Q14651 629 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 SHCBP1Q8NEM2 672 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
COL4A6-207ENST00000487645 ZNF536O15090 1300 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 PNMA6FA0A0J9YX94 578 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 ZBTB5O15062 677 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 MAPK4P31152 587 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 FUT2Q10981 343 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 KIF22Q14807 665 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 ARHGEF6Q15052 776 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 ME3Q16798 604 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 SLC35G1Q2M3R5 365 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 TKFCQ3LXA3 575 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 CPXCR1Q8N123 301 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 ZNF296Q8WUU4 475 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 MOV10L1Q9BXT6 1211 aaKnown RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 MROH8Q9H579 483 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 SH2B1Q9NRF2 756 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-207ENST00000487645 TSKSQ9UJT2 592 aa15.44■□□□□ 0.06
COL4A6-207ENST00000487645 PEX10O60683 326 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 IFNAR1P17181 557 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 SNAP25P60880 206 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 SCRN1Q12765 414 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 STK3Q13188 491 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 NTRK3Q16288 839 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-207ENST00000487645 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 SNRNP48Q6IEG0 339 aaKnown RBP15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CCAR1Q8IX12 1150 aaKnown RBP15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CMTR1Q8N1G2 835 aaKnown RBP15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 AGBL1Q96MI9 1066 aa15.43■□□□□ 0.06
COL4A6-207ENST00000487645 NCOA5Q9HCD5 579 aaKnown RBP15.43■□□□□ 0.06
COL4A6-207ENST00000487645 CPLX1O14810 134 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 STRNO43815 780 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 GNRH1P01148 92 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 FCGRTP55899 365 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
COL4A6-207ENST00000487645 FBXO11Q86XK2 927 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 GTF3C6Q969F1 213 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 PIGSQ96S52 555 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 AMNQ9BXJ7 453 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 MAF1Q9H063 256 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 RBM27Q9P2N5 1060 aaKnown RBP15.42■□□□□ 0.06
COL4A6-207ENST00000487645 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
COL4A6-207ENST00000487645 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 RIPK3Q9Y572 518 aa15.42■□□□□ 0.06
COL4A6-207ENST00000487645 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
COL4A6-207ENST00000487645 PLXNB2O15031 1838 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 PRPF3O43395 683 aaKnown RBP15.41■□□□□ 0.06
COL4A6-207ENST00000487645 CDKL5O76039 1030 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 LARGE1O95461 756 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 ERCC3P19447 782 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 PSMC4P43686 418 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 LBX1P52954 281 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL4A6-207ENST00000487645 NCAPG2Q86XI2 1143 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 ABRAQ8N0Z2 381 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 RNF26Q9BY78 433 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-207ENST00000487645 PORCNQ9H237 461 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
COL4A6-207ENST00000487645 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
COL4A6-207ENST00000487645 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
COL4A6-207ENST00000487645 ALAS1P13196 640 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 HOXD10P28358 340 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
COL4A6-207ENST00000487645 SSRP1Q08945 709 aaKnown RBP15.4■□□□□ 0.06
COL4A6-207ENST00000487645 PLEKHH3Q7Z736 793 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 HOMER1Q86YM7 354 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 NECAB1Q8N987 351 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 CD99L2Q8TCZ2 262 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 SNX21Q969T3 373 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 COA7Q96BR5 231 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 TRERF1Q96PN7 1200 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 PCDHA1Q9Y5I3 950 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 ABCB11O95342 1321 aa15.4■□□□□ 0.06
COL4A6-207ENST00000487645 PPP1R11O60927 126 aaPredicted RBP15.39■□□□□ 0.05
COL4A6-207ENST00000487645 FCER1AP12319 257 aa15.39■□□□□ 0.05
COL4A6-207ENST00000487645 CTGFP29279 349 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms