RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 TOP1P11387 765 aaKnown RBP14.69□□□□□ -0.06
SREBF1-215ENST00000487401 ALAS1P13196 640 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 SDSP20132 328 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 SNAP25P60880 206 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 HAND2P61296 217 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 ZNF589Q86UQ0 364 aaPredicted RBP14.69□□□□□ -0.06
SREBF1-215ENST00000487401 PLEKHM2Q8IWE5 1019 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 ABHD16BQ9H3Z7 469 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 SPC25Q9HBM1 224 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 PRR12Q9ULL5 1215 aa14.69□□□□□ -0.06
SREBF1-215ENST00000487401 NOVP48745 357 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 TLE2Q04725 743 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 SNX17Q15036 470 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 C1orf53Q5VUE5 145 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 GPR153Q6NV75 609 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 MFSD6Q6ZSS7 791 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 LENG1Q96BZ8 264 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-215ENST00000487401 TSEN34Q9BSV6 310 aaKnown RBP14.68□□□□□ -0.06
SREBF1-215ENST00000487401 OSBPL3Q9H4L5 887 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 RNF41Q9H4P4 317 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-215ENST00000487401 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 TCP11L1Q9NUJ3 509 aa14.68□□□□□ -0.06
SREBF1-215ENST00000487401 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
SREBF1-215ENST00000487401 ZNF536O15090 1300 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 ZMYM6O95789 1325 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 A0A0G2JMZ2 1700 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 ZNF236Q9UL36 1845 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 A0A1W2PQ45 241 aaPredicted RBP14.67□□□□□ -0.06
SREBF1-215ENST00000487401 A0A1W2PQY0 241 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 ASB14A6NK59 587 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 HIP1O00291 1037 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 ADAMTS4O75173 837 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 DUSP11O75319 330 aaKnown RBP14.67□□□□□ -0.06
SREBF1-215ENST00000487401 PCP11498 1178 aaKnown RBP14.67□□□□□ -0.06
SREBF1-215ENST00000487401 CNTN2Q02246 1040 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 AKNAD1Q5T1N1 836 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 NUP133Q8WUM0 1156 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 TMEM47Q9BQJ4 181 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 CCPG1Q9ULG6 757 aa14.67□□□□□ -0.06
SREBF1-215ENST00000487401 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 ZNF213O14771 459 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 PQBP1O60828 265 aaKnown RBP14.66□□□□□ -0.06
SREBF1-215ENST00000487401 ACLYP53396 1101 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 KCNA10Q16322 511 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 CCDC144BQ3MJ40 725 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 SYDE2Q5VT97 1194 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 CWC27Q6UX04 472 aaKnown RBP14.66□□□□□ -0.06
SREBF1-215ENST00000487401 NOL8Q76FK4 1167 aaKnown RBP14.66□□□□□ -0.06
SREBF1-215ENST00000487401 DEFB123Q8N688 67 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 FAM133AQ8N9E0 248 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 KLHDC9Q8NEP7 349 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 BADQ92934 168 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 VTI1AQ96AJ9 217 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 FGD4Q96M96 766 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 TTC14Q96N46 770 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 A1CFQ9NQ94 594 aaKnown RBP14.66□□□□□ -0.06
SREBF1-215ENST00000487401 STARD7Q9NQZ5 370 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
SREBF1-215ENST00000487401 SYNRGQ9UMZ2 1314 aa14.66□□□□□ -0.06
SREBF1-215ENST00000487401 TRIM43BA6NCK2 446 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 ICAM1P05362 532 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 CLTBP09497 229 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
SREBF1-215ENST00000487401 SLC16A2P36021 539 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 RASGRP2Q7LDG7 609 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
SREBF1-215ENST00000487401 ESR2Q92731 530 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 TRIM43Q96BQ3 446 aaPredicted RBP14.65□□□□□ -0.06
SREBF1-215ENST00000487401 RANBP17Q9H2T7 1088 aaKnown RBP14.65□□□□□ -0.06
SREBF1-215ENST00000487401 PDLIM7Q9NR12 457 aa14.65□□□□□ -0.06
SREBF1-215ENST00000487401 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
SREBF1-215ENST00000487401 RLFQ13129 1914 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 SOWAHBA6NEL2 793 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 DCDC2CA8MYV0 355 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 GJA9P57773 515 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 TNFAIP2Q03169 654 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 MUM1L1Q5H9M0 696 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 GNASQ5JWF2 1037 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 SH3RF1Q7Z6J0 888 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 GLT1D1Q96MS3 346 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 TMEM39AQ9NV64 488 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 CYP39A1Q9NYL5 469 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 SZT2Q5T011 3432 aa14.64□□□□□ -0.07
SREBF1-215ENST00000487401 PDHBP11177 359 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 RAG1P15918 1043 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 CST5P28325 142 aaPredicted RBP14.63□□□□□ -0.07
SREBF1-215ENST00000487401 NT5C2P49902 561 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 AP5M1Q9H0R1 490 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms