RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
APH1A-208ENST00000486720 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
APH1A-208ENST00000486720 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
APH1A-208ENST00000486720 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
APH1A-208ENST00000486720 HPS5Q9UPZ3 1129 aa17.02■□□□□ 0.32
APH1A-208ENST00000486720 PLEKHA8P1O95397 391 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 GNRH1P01148 92 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 MCM2P49736 904 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 LBX1P52954 281 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
APH1A-208ENST00000486720 TKFCQ3LXA3 575 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
APH1A-208ENST00000486720 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
APH1A-208ENST00000486720 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
APH1A-208ENST00000486720 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
APH1A-208ENST00000486720 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
APH1A-208ENST00000486720 ZNF536O15090 1300 aa17■□□□□ 0.31
APH1A-208ENST00000486720 CPLX1O14810 134 aa17■□□□□ 0.31
APH1A-208ENST00000486720 ZBTB5O15062 677 aa17■□□□□ 0.31
APH1A-208ENST00000486720 CYTH3O43739 400 aa17■□□□□ 0.31
APH1A-208ENST00000486720 PFKFB2O60825 505 aa17■□□□□ 0.31
APH1A-208ENST00000486720 CDC27P30260 824 aa17■□□□□ 0.31
APH1A-208ENST00000486720 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
APH1A-208ENST00000486720 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
APH1A-208ENST00000486720 SRBD1Q8N5C6 995 aaKnown RBP17■□□□□ 0.31
APH1A-208ENST00000486720 CD99L2Q8TCZ2 262 aa17■□□□□ 0.31
APH1A-208ENST00000486720 COA7Q96BR5 231 aa17■□□□□ 0.31
APH1A-208ENST00000486720 MTMR8Q96EF0 704 aa17■□□□□ 0.31
APH1A-208ENST00000486720 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
APH1A-208ENST00000486720 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
APH1A-208ENST00000486720 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
APH1A-208ENST00000486720 FBXO40Q9UH90 709 aa17■□□□□ 0.31
APH1A-208ENST00000486720 CCPG1Q9ULG6 757 aa17■□□□□ 0.31
APH1A-208ENST00000486720 PNMA6FA0A0J9YX94 578 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 TNPO2O14787 897 aaKnown RBP16.99■□□□□ 0.31
APH1A-208ENST00000486720 PEX10O60683 326 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 FMNL1O95466 1100 aaPredicted RBP16.99■□□□□ 0.31
APH1A-208ENST00000486720 ERCC3P19447 782 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 HOXD10P28358 340 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 ADD1P35611 737 aaKnown RBP16.99■□□□□ 0.31
APH1A-208ENST00000486720 PSMC4P43686 418 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 SNAP25P60880 206 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
APH1A-208ENST00000486720 STK3Q13188 491 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 QRICH1Q2TAL8 776 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 WDR78Q5VTH9 848 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 PIGSQ96S52 555 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 PORCNQ9H237 461 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
APH1A-208ENST00000486720 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 STRNO43815 780 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 CDKL5O76039 1030 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 GPR142Q7Z601 462 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 PLEKHH3Q7Z736 793 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
APH1A-208ENST00000486720 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 AGBL1Q96MI9 1066 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
APH1A-208ENST00000486720 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
APH1A-208ENST00000486720 ABCB11O95342 1321 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 ALAS1P13196 640 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 IFNAR1P17181 557 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 PRMT2P55345 433 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
APH1A-208ENST00000486720 FUT2Q10981 343 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 SCRN1Q12765 414 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 ME3Q16798 604 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 ABRAQ8N0Z2 381 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 SOCS4Q8WXH5 440 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 TRIM47Q96LD4 638 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
APH1A-208ENST00000486720 RNF146Q9NTX7 359 aa16.97■□□□□ 0.31
APH1A-208ENST00000486720 COL11A1P12107 1806 aaPredicted RBP16.96■□□□□ 0.31
APH1A-208ENST00000486720 CEP350Q5VT06 3117 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 KCTD2Q14681 263 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 NTRK3Q16288 839 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 USH1GQ495M9 461 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
APH1A-208ENST00000486720 TRIM22Q8IYM9 498 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.31
APH1A-208ENST00000486720 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 TRERF1Q96PN7 1200 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
APH1A-208ENST00000486720 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 MAF1Q9H063 256 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 MRPL11Q9Y3B7 192 aaKnown RBP16.96■□□□□ 0.31
APH1A-208ENST00000486720 RIPK3Q9Y572 518 aa16.96■□□□□ 0.31
APH1A-208ENST00000486720 SLC15A5A6NIM6 579 aa16.95■□□□□ 0.3
APH1A-208ENST00000486720 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms