RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MOCS3O95396 460 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 E2F5Q15329 346 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 ZNF174Q15697 407 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC121Q6ZUS5 278 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 ZNHIT6Q9NWK9 470 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 MYH7P12883 1935 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 RTN2O75298 545 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 TACC1O75410 805 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 GLI1P08151 1106 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 PPARDQ03181 441 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 ITGB3BPQ13352 177 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC96Q2M329 555 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC181Q5TID7 509 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 C8orf74Q6P047 294 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CYFIP2Q96F07 1278 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 ATP6V1G3Q96LB4 118 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 ACTR5Q9H9F9 607 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 RBM12Q9NTZ6 932 aaKnown RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 SLIT3O75094 1523 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 PDS5AQ29RF7 1337 aaKnown RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 MYH10P35580 1976 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 GOLGA6L7A0A1B0GV03 622 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 ZSCAN5CA6NGD5 496 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 B4DLN1 442 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 NCK2O43639 380 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 RPN1P04843 607 aaKnown RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 NAIF1Q69YI7 327 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-208ENST00000486641 CD302Q8IX05 232 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 MAGEC3Q8TD91 643 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 IFT81Q8WYA0 676 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 TSGA10Q9BZW7 698 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 GDF3Q9NR23 364 aa11.85□□□□□ -0.51
CCDC171-208ENST00000486641 MYH13Q9UKX3 1938 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 ESYT3A0FGR9 886 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-208ENST00000486641 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-208ENST00000486641 SRGNP10124 158 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 EZRP15311 586 aaKnown RBP11.84□□□□□ -0.51
CCDC171-208ENST00000486641 ERCC3P19447 782 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 MCAMP43121 646 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 DNM2P50570 870 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 GUCY2FP51841 1108 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 PPP4R3AQ6IN85 833 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC50Q8IVM0 306 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 EPB41L5Q9HCM4 733 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 HYOU1Q9Y4L1 999 aa11.84□□□□□ -0.51
CCDC171-208ENST00000486641 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.51
CCDC171-208ENST00000486641 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.51
CCDC171-208ENST00000486641 PAFAH1B1P43034 410 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 ZBED6P86452 979 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 SPA17Q15506 151 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 ANKRD20A8PQ5CZ79 823 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 FMNL3Q8IVF7 1028 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 ADSSL1Q8N142 457 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 NUP133Q8WUM0 1156 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 MS4A14Q96JA4 679 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM6Q9C030 488 aaPredicted RBP11.83□□□□□ -0.51
CCDC171-208ENST00000486641 PCDHA13Q9Y5I0 950 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 ADAMTS7Q9UKP4 1686 aa11.83□□□□□ -0.51
CCDC171-208ENST00000486641 NID2Q14112 1375 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 SRRM3A6NNA2 597 aaPredicted RBP11.83□□□□□ -0.52
CCDC171-208ENST00000486641 OPLAHO14841 1288 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 USO1O60763 962 aaKnown RBP11.83□□□□□ -0.52
CCDC171-208ENST00000486641 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
CCDC171-208ENST00000486641 HPDP32754 393 aaPredicted RBP11.83□□□□□ -0.52
CCDC171-208ENST00000486641 GUCY2DQ02846 1103 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 PTGDRQ13258 359 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 QPCTQ16769 361 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 GLE1Q53GS7 698 aaKnown RBP11.83□□□□□ -0.52
CCDC171-208ENST00000486641 EGFL6Q8IUX8 553 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 CEP120Q8N960 986 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
CCDC171-208ENST00000486641 A0A1B0GUA9 196 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms