RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 COL4A3BPQ9Y5P4 624 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 RGPD5Q99666 1765 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 LRP5O75197 1615 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 PTPRCP08575 1304 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 RGPD2P0DJD1 1756 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 A0A1W2PQH9 124 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 PPFIA3O75145 1194 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 EPHA1P21709 976 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 CDK8P49336 464 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 GSTM4Q03013 218 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 KRT24Q2M2I5 525 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 LRRFIP1Q32MZ4 808 aaKnown RBP7.47□□□□□ -1.21
USP41-204ENST00000486536 MTERF2Q49AM1 385 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 C20orf194Q5TEA3 1177 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 FTSJ3Q8IY81 847 aaKnown RBP7.47□□□□□ -1.21
USP41-204ENST00000486536 TTC5Q8N0Z6 440 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 CACTIN-AS1Q8N1I8 211 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 C19orf47Q8N9M1 422 aaKnown RBP7.47□□□□□ -1.21
USP41-204ENST00000486536 EXOC6Q8TAG9 804 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 ZC3H12CQ9C0D7 883 aaKnown RBP7.47□□□□□ -1.21
USP41-204ENST00000486536 CHMP4BQ9H444 224 aaKnown RBP7.47□□□□□ -1.21
USP41-204ENST00000486536 CACNA2D2Q9NY47 1150 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 PCDHA4Q9UN74 947 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 PLCH1Q4KWH8 1693 aa7.47□□□□□ -1.21
USP41-204ENST00000486536 EP400Q96L91 3159 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 GFRA2O00451 464 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 KCNQ3O43525 872 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 TRIM27P14373 513 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 ADH6P28332 368 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 CDC25BP30305 580 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 GYS2P54840 703 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 SQSTM1Q13501 440 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 HGSNATQ68CP4 663 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 PSAPL1Q6NUJ1 521 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 TTC6Q86TZ1 520 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 FMNL2Q96PY5 1086 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 SOX17Q9H6I2 414 aaPredicted RBP7.46□□□□□ -1.22
USP41-204ENST00000486536 PCDH12Q9NPG4 1184 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 TMEM260Q9NX78 707 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 LEMD3Q9Y2U8 911 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 PRKAB1Q9Y478 270 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.22
USP41-204ENST00000486536 H3BRJ5 948 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 RGS9O75916 674 aaPredicted RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 SNRPA1P09661 255 aaKnown RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 ARAFP10398 606 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 MX2P20592 715 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 MVPQ14764 893 aaKnown RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 ARSHQ5FYA8 562 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 C16orf86Q6ZW13 317 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 DEFB132Q7Z7B7 95 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 KIAA0907Q7Z7F0 614 aaPredicted RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 FAM178BQ8IXR5 827 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 IL22RA1Q8N6P7 574 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 ZSCAN1Q8NBB4 408 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 GPBAR1Q8TDU6 330 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 PANK1Q8TE04 598 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 THAP3Q8WTV1 239 aaPredicted RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 TM9SF2Q99805 663 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 TMX1Q9H3N1 280 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 TMOD3Q9NYL9 352 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
USP41-204ENST00000486536 DDX19BQ9UMR2 479 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 KDM2BQ8NHM5 1336 aa7.45□□□□□ -1.22
USP41-204ENST00000486536 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 HTR3BO95264 441 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 CYP11A1P05108 521 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 SELPP16109 830 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 GUCY2CP25092 1073 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 ARL4DP49703 201 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 SLC39A6Q13433 755 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 INPP5AQ14642 412 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 C6orf15Q6UXA7 325 aaPredicted RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 JMYQ8N9B5 988 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 SLC7A3Q8WY07 619 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 ZNF496Q96IT1 587 aaPredicted RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 MDFIQ99750 246 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 TEX13AQ9BXU3 409 aaPredicted RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
USP41-204ENST00000486536 PFDN2Q9UHV9 154 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 CORINQ9Y5Q5 1042 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 SNCAIPQ9Y6H5 919 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 GLI3P10071 1580 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 ABCC4O15439 1325 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
USP41-204ENST00000486536 MEIS3P2A8K0S8 358 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 B2RBV5 119 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 TCERG1O14776 1098 aaKnown RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 EIF2S2P20042 333 aaKnown RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 POU4F3Q15319 338 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 C2orf27AQ580R0 203 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms