RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 C22orf23Q9BZE7 217 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 EHD4Q9H223 541 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 RNF41Q9H4P4 317 aaPredicted RBP6.64□□□□□ -1.35
COPS3-208ENST00000486032 ZNF287Q9HBT7 754 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 PICK1Q9NRD5 415 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 ISY1Q9ULR0 285 aaKnown RBP6.64□□□□□ -1.35
COPS3-208ENST00000486032 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 ZMYM6O95789 1325 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 NEDD4P46934 1319 aa6.64□□□□□ -1.35
COPS3-208ENST00000486032 WDR33Q9C0J8 1336 aaKnown RBP6.64□□□□□ -1.35
COPS3-208ENST00000486032 COL2A1P02458 1487 aaPredicted RBP6.64□□□□□ -1.35
COPS3-208ENST00000486032 FOXN1O15353 648 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 NMT2O60551 498 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 HSPA1AP0DMV8 641 aaKnown RBP6.63□□□□□ -1.35
COPS3-208ENST00000486032 HSPA1BP0DMV9 641 aaKnown RBP6.63□□□□□ -1.35
COPS3-208ENST00000486032 MYH8P13535 1937 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 CAP2P40123 477 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
COPS3-208ENST00000486032 SRSF11Q05519 484 aaKnown RBP6.63□□□□□ -1.35
COPS3-208ENST00000486032 VGLL4Q14135 290 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 SEPT2Q15019 361 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 LINC01559Q495D7 138 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 TATDN1Q6P1N9 297 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 CYB5R4Q7L1T6 521 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ANKRD13AQ8IZ07 590 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 SCYL3Q8IZE3 742 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.63□□□□□ -1.35
COPS3-208ENST00000486032 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ESR2Q92731 530 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 SLC10A4Q96EP9 437 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ROBO3Q96MS0 1386 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 NEK1Q96PY6 1258 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 KRT23Q9C075 422 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ANAPC4Q9UJX5 808 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ZBTB21Q9ULJ3 1066 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
COPS3-208ENST00000486032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.63□□□□□ -1.35
COPS3-208ENST00000486032 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
COPS3-208ENST00000486032 ZSWIM8A7E2V4 1837 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 LAMA4Q16363 1823 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CDC14CA4D256 554 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 TRIM75PA6NK02 468 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 USP17L5A8MUK1 530 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 PRC1O43663 620 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 ORC4O43929 436 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CTNND1O60716 968 aaKnown RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 CASTP20810 708 aaKnown RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 FGD1P98174 961 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CAP1Q01518 475 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 ICA1Q05084 483 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 COL9A3Q14050 684 aaPredicted RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 DEFB115Q30KQ5 88 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 RGMBQ6NW40 437 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 BLOC1S2Q6QNY1 142 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 NOL8Q76FK4 1167 aaKnown RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 BAP1Q92560 729 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 OPTNQ96CV9 577 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CCDC17Q96LX7 622 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 FEZ1Q99689 392 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 UBAC1Q9BSL1 405 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 UPF3BQ9BZI7 483 aaKnown RBP6.62□□□□□ -1.35
COPS3-208ENST00000486032 R3HDMLQ9H3Y0 253 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CNNM2Q9H8M5 875 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 ZSWIM5Q9P217 1185 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 ZNF112Q9UJU3 913 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 STX8Q9UNK0 236 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 ZHX2Q9Y6X8 837 aa6.62□□□□□ -1.35
COPS3-208ENST00000486032 TNKSO95271 1327 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 ERICH2A1L162 156 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 IFIT3O14879 490 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 ASNSP08243 561 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 EEF2P13639 858 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 PTPRAP18433 802 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 PSMA5P28066 241 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 GUCY1A2P33402 732 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 ECE1P42892 770 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 FKBP1BP68106 108 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 KIF23Q02241 960 aaPredicted RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 SPP2Q13103 211 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 DGKZQ13574 1117 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 KRT32Q14532 448 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 WTAPQ15007 396 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 NOL9Q5SY16 702 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 GADL1Q6ZQY3 521 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 TMEM179Q6ZVK1 233 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 IQCA1Q86XH1 822 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 RAB11FIP4Q86YS3 637 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 LRRC47Q8N1G4 583 aaKnown RBP6.61□□□□□ -1.35
COPS3-208ENST00000486032 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 ACER1Q8TDN7 264 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 CEP95Q96GE4 821 aa6.61□□□□□ -1.35
COPS3-208ENST00000486032 UNC93B1Q9H1C4 597 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms