RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 WDR78Q5VTH9 848 aa27.5■■□□□ 1.99
ABCF3-216ENST00000485921 CTU1Q7Z7A3 348 aaKnown RBP27.5■■□□□ 1.99
ABCF3-216ENST00000485921 NBPF11Q86T75 865 aa27.5■■□□□ 1.99
ABCF3-216ENST00000485921 NCAPG2Q86XI2 1143 aa27.5■■□□□ 1.99
ABCF3-216ENST00000485921 TBC1D32Q96NH3 1257 aa27.5■■□□□ 1.99
ABCF3-216ENST00000485921 LARP6Q9BRS8 491 aaKnown RBP27.5■■□□□ 1.99
ABCF3-216ENST00000485921 JMJD4Q9H9V9 463 aa27.5■■□□□ 1.99
ABCF3-216ENST00000485921 CWC22Q9HCG8 908 aaKnown RBP27.5■■□□□ 1.99
ABCF3-216ENST00000485921 ZSWIM8A7E2V4 1837 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 GOLGA8AA7E2F4 631 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 RTN1Q16799 776 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 SLC35G1Q2M3R5 365 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 OTOP1Q7RTM1 612 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 COA7Q96BR5 231 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 AGBL1Q96MI9 1066 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 LZTS2Q9BRK4 669 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 MROH8Q9H579 483 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 RIPK3Q9Y572 518 aa27.49■■□□□ 1.99
ABCF3-216ENST00000485921 PLEKHA8P1O95397 391 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 ICAM1P05362 532 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 HOXD10P28358 340 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 COPB2P35606 906 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 CDC37Q16543 378 aaPredicted RBP27.48■■□□□ 1.99
ABCF3-216ENST00000485921 GPR142Q7Z601 462 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 PLEKHH3Q7Z736 793 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 RIOX1Q9H6W3 641 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 RBM28Q9NW13 759 aaKnown RBP27.48■■□□□ 1.99
ABCF3-216ENST00000485921 HPS5Q9UPZ3 1129 aa27.48■■□□□ 1.99
ABCF3-216ENST00000485921 PDIA3P30101 505 aaKnown RBP27.47■■□□□ 1.99
ABCF3-216ENST00000485921 METAP2P50579 478 aaKnown RBP eCLIP27.47■■□□□ 1.99
ABCF3-216ENST00000485921 AK2P54819 239 aa27.47■■□□□ 1.99
ABCF3-216ENST00000485921 ANKRD1Q15327 319 aa27.47■■□□□ 1.99
ABCF3-216ENST00000485921 CCPG1Q9ULG6 757 aa27.47■■□□□ 1.99
ABCF3-216ENST00000485921 MGAMO43451 1857 aa27.47■■□□□ 1.99
ABCF3-216ENST00000485921 CYTH3O43739 400 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 SMARCA1P28370 1054 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 TMTC3Q6ZXV5 915 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 CMTR1Q8N1G2 835 aaKnown RBP27.46■■□□□ 1.99
ABCF3-216ENST00000485921 SRBD1Q8N5C6 995 aaKnown RBP27.46■■□□□ 1.99
ABCF3-216ENST00000485921 MTMR8Q96EF0 704 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 ZNF274Q96GC6 653 aaPredicted RBP27.46■■□□□ 1.99
ABCF3-216ENST00000485921 SPZ1Q9BXG8 430 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 SRRDQ9UH36 339 aa27.46■■□□□ 1.99
ABCF3-216ENST00000485921 ALAS1P13196 640 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 CDC27P30260 824 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 PPP2R5BQ15173 497 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 QRICH1Q2TAL8 776 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 HOMER2Q9NSB8 354 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 FAM217BQ9NTX9 383 aaPredicted RBP27.45■■□□□ 1.98
ABCF3-216ENST00000485921 PNMA2Q9UL42 364 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 IVNS1ABPQ9Y6Y0 642 aa27.45■■□□□ 1.98
ABCF3-216ENST00000485921 TAL1P17542 331 aaPredicted RBP27.44■■□□□ 1.98
ABCF3-216ENST00000485921 PTPREP23469 700 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 TKFCQ3LXA3 575 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 HOMER1Q86YM7 354 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 CCDC82Q8N4S0 544 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 PIGSQ96S52 555 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 GJD2Q9UKL4 321 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 GABRQQ9UN88 632 aa27.44■■□□□ 1.98
ABCF3-216ENST00000485921 CCDC196A0A1B0GTZ2 297 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 ZBTB5O15062 677 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 STRNO43815 780 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 ADD1P35611 737 aaKnown RBP27.43■■□□□ 1.98
ABCF3-216ENST00000485921 PRMT2P55345 433 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 CCT2P78371 535 aaKnown RBP27.43■■□□□ 1.98
ABCF3-216ENST00000485921 PRKCZQ05513 592 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 RABEP1Q15276 862 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 CHST13Q8NET6 341 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 PIBF1Q8WXW3 757 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 TRERF1Q96PN7 1200 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 RNF146Q9NTX7 359 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 TPCN1Q9ULQ1 816 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 NID2Q14112 1375 aa27.43■■□□□ 1.98
ABCF3-216ENST00000485921 SLC15A5A6NIM6 579 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 FCER1AP12319 257 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 FLT3LGP49771 235 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 MORN1Q5T089 497 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 NOL8Q76FK4 1167 aaKnown RBP27.42■■□□□ 1.98
ABCF3-216ENST00000485921 FBXO11Q86XK2 927 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 RRP36Q96EU6 259 aaKnown RBP27.42■■□□□ 1.98
ABCF3-216ENST00000485921 NUDT12Q9BQG2 462 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 FBXO40Q9UH90 709 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 PTPN22Q9Y2R2 807 aa27.42■■□□□ 1.98
ABCF3-216ENST00000485921 DOCK3Q8IZD9 2030 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 BAZ2BQ9UIF8 2168 aaKnown RBP27.41■■□□□ 1.98
ABCF3-216ENST00000485921 PNMA6FA0A0J9YX94 578 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 STK3Q13188 491 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 GRB14Q14449 540 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 PKN2Q16513 984 aaKnown RBP27.41■■□□□ 1.98
ABCF3-216ENST00000485921 USH1GQ495M9 461 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 SOCS4Q8WXH5 440 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 MMP19Q99542 508 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 ACAD9Q9H845 621 aa27.41■■□□□ 1.98
ABCF3-216ENST00000485921 MUM1L1Q5H9M0 696 aa27.4■■□□□ 1.98
ABCF3-216ENST00000485921 COL13A1Q5TAT6 717 aaPredicted RBP27.4■■□□□ 1.98
ABCF3-216ENST00000485921 ABRAQ8N0Z2 381 aa27.4■■□□□ 1.98
ABCF3-216ENST00000485921 AMNQ9BXJ7 453 aa27.4■■□□□ 1.98
ABCF3-216ENST00000485921 NCOA5Q9HCD5 579 aaKnown RBP27.4■■□□□ 1.98
ABCF3-216ENST00000485921 PPP1R11O60927 126 aaPredicted RBP27.39■■□□□ 1.98
ABCF3-216ENST00000485921 FUT2Q10981 343 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms