RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
SND1-212ENST00000485871 RPAP3Q9H6T3 665 aaPredicted RBP13.06□□□□□ -0.32
SND1-212ENST00000485871 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
SND1-212ENST00000485871 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 ADAMTS3O15072 1205 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 MMP1P03956 469 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 KIF23Q02241 960 aaPredicted RBP13.05□□□□□ -0.32
SND1-212ENST00000485871 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
SND1-212ENST00000485871 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
SND1-212ENST00000485871 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
SND1-212ENST00000485871 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
SND1-212ENST00000485871 ESYT2A0FGR8 921 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 KIF28PB7ZC32 967 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 H3BQV1 296 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 M0R2N6 131 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 SOX10P56693 466 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
SND1-212ENST00000485871 SAPCD2Q86UD0 394 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
SND1-212ENST00000485871 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
SND1-212ENST00000485871 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
SND1-212ENST00000485871 TRAK2O60296 914 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.32
SND1-212ENST00000485871 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
SND1-212ENST00000485871 SNAP25P60880 206 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 PRPF38BQ5VTL8 546 aaKnown RBP13.03□□□□□ -0.32
SND1-212ENST00000485871 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
SND1-212ENST00000485871 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 COA7Q96BR5 231 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 ZMYND12Q9H0C1 365 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
SND1-212ENST00000485871 ZNF536O15090 1300 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 MYPNQ86TC9 1320 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
SND1-212ENST00000485871 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.32
SND1-212ENST00000485871 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.32
SND1-212ENST00000485871 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 XBP1P17861 261 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 DSG3P32926 999 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 TRIM29Q14134 588 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 L1TD1Q5T7N2 865 aaKnown RBP13.02□□□□□ -0.33
SND1-212ENST00000485871 SPRYD7Q5W111 196 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 GPAT2Q6NUI2 795 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
SND1-212ENST00000485871 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.33
SND1-212ENST00000485871 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
SND1-212ENST00000485871 LCTP09848 1927 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 OPLAHO14841 1288 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 FLOT1O75955 427 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 TAL1P17542 331 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 HUNKP57058 714 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 NR5A1Q13285 461 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 FAM173BQ6P4H8 233 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 RASAL3Q86YV0 1011 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms