RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 USP17L12C9JPN9 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L11C9JVI0 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L21D6R901 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L18D6R9N7 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L22D6RA61 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L17D6RBQ6 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L19D6RCP7 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L20D6RJB6 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 M0R2N6 131 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 RNF113AO15541 343 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 STX10O60499 249 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 MAPTP10636 758 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 HSPD1P10809 573 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 TOP1P11387 765 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 ATP1A3P13637 1013 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 ZNF18P17022 549 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP5P45974 858 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 PPP2R3AQ06190 1150 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L24Q0WX57 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 DPYDQ12882 1025 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 SF3A1Q15459 793 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 CT47A1Q5JQC4 288 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 RESP18Q5W5W9 173 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 MPRIPQ6WCQ1 1025 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 HOMER1Q86YM7 354 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 GALNT6Q8NCL4 622 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 MSANTD4Q8NCY6 345 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 GOLGA5Q8TBA6 731 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 SCG3Q8WXD2 468 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 GOLGA1Q92805 767 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 SMARCE1Q969G3 411 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 NGLY1Q96IV0 654 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 SLC26A8Q96RN1 970 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 CARD6Q9BX69 1037 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 LRRC2Q9BYS8 371 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 C19orf44Q9H6X5 657 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 NCOA5Q9HCD5 579 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 ARFGAP3Q9NP61 516 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 ATG3Q9NT62 314 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 NDFIP2Q9NV92 336 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 INTS13Q9NVM9 706 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 PAG1Q9NWQ8 432 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 STK36Q9NRP7 1315 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 LRP6O75581 1613 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 TIAM2Q8IVF5 1701 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 AFDNP55196 1824 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 KIF13AQ9H1H9 1805 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 ECM29Q5VYK3 1845 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PAPPAQ13219 1627 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 ZMYM6O95789 1325 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 WDR17Q8IZU2 1322 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PRAMEF22A3QJZ6 481 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 GOLGA8BA8MQT2 603 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 KIF28PB7ZC32 967 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 EML1O00423 815 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 C2CD2LO14523 706 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 FOXP2O15409 715 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 OIP5O43482 229 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 CUTAO60888 179 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 WDHD1O75717 1129 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 CDKL5O76039 1030 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 CIAO1O76071 339 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 SEC31AO94979 1220 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 TUBBP07437 444 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 AMPD1P23109 780 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 CASQ1P31415 396 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 IL15P40933 162 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 SYKP43405 635 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 UBASH3AP57075 661 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 TNP2Q05952 138 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PTK7Q13308 1070 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 SMC1AQ14683 1233 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PTPAQ15257 358 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 ZSCAN26Q16670 478 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 GORABQ5T7V8 394 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 NT5DC1Q5TFE4 455 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 OLFM4Q6UX06 510 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 DDX46Q7L014 1031 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 ARHGEF25Q86VW2 580 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 BEND7Q8N7W2 519 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 GOLGA6L1Q8N7Z2 621 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 TRIML1Q8N9V2 468 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 NEK11Q8NG66 645 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 KLHDC4Q8TBB5 520 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 DPF2Q92785 391 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 ERCC4Q92889 916 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 FMNL2Q96PY5 1086 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 MAP3K14Q99558 947 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 MYD88Q99836 296 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 BAG1Q99933 345 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 FUT8Q9BYC5 575 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PHACTR1Q9C0D0 580 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 EFCC1Q9HA90 598 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 RRAGCQ9HB90 399 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 GGA1Q9UJY5 639 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 GDF2Q9UK05 429 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms