RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TPCN1Q9ULQ1 816 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.3
COL6A2-208ENST00000485591 BAZ2BQ9UIF8 2168 aaKnown RBP23.14■■□□□ 1.3
COL6A2-208ENST00000485591 CDC27P30260 824 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 STAT3P40763 770 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 LBX1P52954 281 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 SNAP25P60880 206 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
COL6A2-208ENST00000485591 RIOX2Q8IUF8 465 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 CPXCR1Q8N123 301 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 SHCBP1Q8NEM2 672 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 RAVER2Q9HCJ3 691 aaKnown RBP23.14■■□□□ 1.29
COL6A2-208ENST00000485591 ZNF236Q9UL36 1845 aa23.14■■□□□ 1.29
COL6A2-208ENST00000485591 ST18O60284 1047 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 ICAM1P05362 532 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 COPB2P35606 906 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 KIF22Q14807 665 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 SNRNP48Q6IEG0 339 aaKnown RBP23.13■■□□□ 1.29
COL6A2-208ENST00000485591 CCDC174Q6PII3 467 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
COL6A2-208ENST00000485591 CD99L2Q8TCZ2 262 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 PORCNQ9H237 461 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 SMCHD1A6NHR9 2005 aa23.13■■□□□ 1.29
COL6A2-208ENST00000485591 CNTNAP5Q8WYK1 1306 aa23.12■■□□□ 1.29
COL6A2-208ENST00000485591 SLC25A27O95847 323 aa23.12■■□□□ 1.29
COL6A2-208ENST00000485591 MAPK4P31152 587 aa23.12■■□□□ 1.29
COL6A2-208ENST00000485591 NOL8Q76FK4 1167 aaKnown RBP23.12■■□□□ 1.29
COL6A2-208ENST00000485591 VAT1LQ9HCJ6 419 aa23.12■■□□□ 1.29
COL6A2-208ENST00000485591 ZBTB5O15062 677 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 CTGFP29279 349 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 ADD1P35611 737 aaKnown RBP23.11■■□□□ 1.29
COL6A2-208ENST00000485591 FCGRTP55899 365 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
COL6A2-208ENST00000485591 FUT2Q10981 343 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 QRICH1Q2TAL8 776 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 CMTR1Q8N1G2 835 aaKnown RBP23.11■■□□□ 1.29
COL6A2-208ENST00000485591 AGBL1Q96MI9 1066 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 ARHGAP39Q9C0H5 1083 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 MROH8Q9H579 483 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 EFCC1Q9HA90 598 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 LIMCH1Q9UPQ0 1083 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 DOCK3Q8IZD9 2030 aa23.11■■□□□ 1.29
COL6A2-208ENST00000485591 PFKFB2O60825 505 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 ERCC3P19447 782 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 PSMC4P43686 418 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 CAP1Q01518 475 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 STK3Q13188 491 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 ME3Q16798 604 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 TKFCQ3LXA3 575 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 CCAR1Q8IX12 1150 aaKnown RBP23.1■■□□□ 1.29
COL6A2-208ENST00000485591 TRIM47Q96LD4 638 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 PIGSQ96S52 555 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 SLKQ9H2G2 1235 aaPredicted RBP23.1■■□□□ 1.29
COL6A2-208ENST00000485591 NCOA5Q9HCD5 579 aaKnown RBP23.1■■□□□ 1.29
COL6A2-208ENST00000485591 CCPG1Q9ULG6 757 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 RIPK3Q9Y572 518 aa23.1■■□□□ 1.29
COL6A2-208ENST00000485591 TNPO2O14787 897 aaKnown RBP23.09■■□□□ 1.29
COL6A2-208ENST00000485591 SCRN1Q12765 414 aa23.09■■□□□ 1.29
COL6A2-208ENST00000485591 ARHGEF6Q15052 776 aa23.09■■□□□ 1.29
COL6A2-208ENST00000485591 NCAPG2Q86XI2 1143 aa23.09■■□□□ 1.29
COL6A2-208ENST00000485591 HOMER1Q86YM7 354 aa23.09■■□□□ 1.29
COL6A2-208ENST00000485591 RRP36Q96EU6 259 aaKnown RBP23.09■■□□□ 1.29
COL6A2-208ENST00000485591 PRDM10Q9NQV6 1147 aa23.09■■□□□ 1.29
COL6A2-208ENST00000485591 ZNFX1Q9P2E3 1918 aaKnown RBP23.09■■□□□ 1.29
COL6A2-208ENST00000485591 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 LARGE1O95461 756 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 GNRH1P01148 92 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 NTRK3Q16288 839 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 GPR142Q7Z601 462 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 FBXO11Q86XK2 927 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 CHST13Q8NET6 341 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
COL6A2-208ENST00000485591 SEC63Q9UGP8 760 aaKnown RBP23.08■■□□□ 1.29
COL6A2-208ENST00000485591 ECM2O94769 699 aaPredicted RBP23.07■■□□□ 1.28
COL6A2-208ENST00000485591 FMNL1O95466 1100 aaPredicted RBP23.07■■□□□ 1.28
COL6A2-208ENST00000485591 ALAS1P13196 640 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 IFNAR1P17181 557 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 WDR78Q5VTH9 848 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL6A2-208ENST00000485591 PLEKHH3Q7Z736 793 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 GTF3C6Q969F1 213 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 ZSCAN31Q96LW9 406 aaPredicted RBP23.07■■□□□ 1.28
COL6A2-208ENST00000485591 CWC22Q9HCG8 908 aaKnown RBP23.07■■□□□ 1.28
COL6A2-208ENST00000485591 RNF146Q9NTX7 359 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 FBXO40Q9UH90 709 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 PLXNA1Q9UIW2 1896 aa23.07■■□□□ 1.28
COL6A2-208ENST00000485591 CPLX1O14810 134 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 PPP1R11O60927 126 aaPredicted RBP23.06■■□□□ 1.28
COL6A2-208ENST00000485591 CD2BP2O95400 341 aaKnown RBP23.06■■□□□ 1.28
COL6A2-208ENST00000485591 TAL1P17542 331 aaPredicted RBP23.06■■□□□ 1.28
COL6A2-208ENST00000485591 SLC4A3P48751 1232 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 MCM2P49736 904 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 TRAF1Q13077 416 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 CPLX2Q6PUV4 134 aaKnown RBP23.06■■□□□ 1.28
COL6A2-208ENST00000485591 COA7Q96BR5 231 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 ACAD9Q9H845 621 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 SH2B1Q9NRF2 756 aaPredicted RBP23.06■■□□□ 1.28
COL6A2-208ENST00000485591 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms