RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MAP2K2P36507 400 aa20.34■□□□□ 0.85
CHMP3-207ENST00000485465 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
CHMP3-207ENST00000485465 LBX2Q6XYB7 198 aa20.34■□□□□ 0.85
CHMP3-207ENST00000485465 SEC63Q9UGP8 760 aaKnown RBP20.34■□□□□ 0.85
CHMP3-207ENST00000485465 RLFQ13129 1914 aa20.33■□□□□ 0.85
CHMP3-207ENST00000485465 DEXIO95424 95 aa20.33■□□□□ 0.85
CHMP3-207ENST00000485465 PKN1Q16512 942 aa20.33■□□□□ 0.85
CHMP3-207ENST00000485465 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.85
CHMP3-207ENST00000485465 REPS2Q8NFH8 660 aa20.33■□□□□ 0.85
CHMP3-207ENST00000485465 PARK7Q99497 189 aaKnown RBP20.33■□□□□ 0.85
CHMP3-207ENST00000485465 CTDP1Q9Y5B0 961 aaPredicted RBP20.33■□□□□ 0.85
CHMP3-207ENST00000485465 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 SCG2P13521 617 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 GJB2P29033 226 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 PFKFB3Q16875 520 aaPredicted RBP20.32■□□□□ 0.84
CHMP3-207ENST00000485465 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 POTEEQ6S8J3 1075 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 MB21D1Q8N884 522 aa20.32■□□□□ 0.84
CHMP3-207ENST00000485465 GTF3C2Q8WUA4 911 aaPredicted RBP20.32■□□□□ 0.84
CHMP3-207ENST00000485465 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
CHMP3-207ENST00000485465 PPP1R11O60927 126 aaPredicted RBP20.31■□□□□ 0.84
CHMP3-207ENST00000485465 TMEM132BQ14DG7 1078 aa20.31■□□□□ 0.84
CHMP3-207ENST00000485465 FAM184AQ8NB25 1140 aa20.31■□□□□ 0.84
CHMP3-207ENST00000485465 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
CHMP3-207ENST00000485465 WASF1Q92558 559 aa20.31■□□□□ 0.84
CHMP3-207ENST00000485465 ZNF536O15090 1300 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 ALDH1A1P00352 501 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 ICAM1P05362 532 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 OAZ1P54368 228 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 TAF1CQ15572 869 aaPredicted RBP20.3■□□□□ 0.84
CHMP3-207ENST00000485465 FBXO11Q86XK2 927 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 IPO9Q96P70 1041 aaKnown RBP20.3■□□□□ 0.84
CHMP3-207ENST00000485465 ALG1Q9BT22 464 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 AMNQ9BXJ7 453 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 RAVER2Q9HCJ3 691 aaKnown RBP20.3■□□□□ 0.84
CHMP3-207ENST00000485465 BTBD7Q9P203 1132 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 RBPJLQ9UBG7 517 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 RABGAP1Q9Y3P9 1069 aa20.3■□□□□ 0.84
CHMP3-207ENST00000485465 ATP2A1O14983 1001 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 CNMDO75829 334 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
CHMP3-207ENST00000485465 WWC2Q6AWC2 1192 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 HEATR3Q7Z4Q2 680 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 GPKOWQ92917 476 aaPredicted RBP eCLIP20.29■□□□□ 0.84
CHMP3-207ENST00000485465 AGBL1Q96MI9 1066 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 AIFM3Q96NN9 605 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 PAGR1Q9BTK6 254 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 ZNF214Q9UL59 606 aaPredicted RBP20.29■□□□□ 0.84
CHMP3-207ENST00000485465 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
CHMP3-207ENST00000485465 hCG_1984214I3L0E3 225 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 TRAF1Q13077 416 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 ZNF713Q8N859 430 aaPredicted RBP20.28■□□□□ 0.84
CHMP3-207ENST00000485465 COA7Q96BR5 231 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 ZFYVE28Q9HCC9 887 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 TXNRD2Q9NNW7 524 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 BARHL2Q9NY43 387 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 CCPG1Q9ULG6 757 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 PCDHA1Q9Y5I3 950 aa20.28■□□□□ 0.84
CHMP3-207ENST00000485465 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
CHMP3-207ENST00000485465 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 THSD7BQ9C0I4 1608 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 STXBP3O00186 592 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 CA12O43570 354 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 PEX10O60683 326 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 STAT3P40763 770 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 PLS1Q14651 629 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 USH1GQ495M9 461 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
CHMP3-207ENST00000485465 SH3GLB2Q9NR46 395 aa20.27■□□□□ 0.84
CHMP3-207ENST00000485465 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
CHMP3-207ENST00000485465 CRHR2Q13324 411 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 Q3C1V9 767 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 SNRNP48Q6IEG0 339 aaKnown RBP20.26■□□□□ 0.83
CHMP3-207ENST00000485465 ANKRD13CQ8N6S4 541 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 SPATC1LQ9H0A9 340 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 MORF4L1Q9UBU8 362 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 ABCB11O95342 1321 aa20.26■□□□□ 0.83
CHMP3-207ENST00000485465 TLR2O60603 784 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 XBP1P17861 261 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 FOSBP53539 338 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 NAPAP54920 295 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 ERVK-24P63145 666 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 LARP1BQ659C4 914 aaKnown RBP20.25■□□□□ 0.83
CHMP3-207ENST00000485465 TYW1BQ6NUM6 668 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 PPP1R18Q6NYC8 613 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 RIOX2Q8IUF8 465 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 SHISA4Q96DD7 197 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 CPA4Q9UI42 421 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
CHMP3-207ENST00000485465 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
CHMP3-207ENST00000485465 ALAS1P13196 640 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms