RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 LDLRAD1Q5T700 205 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 ERICH6BQ5W0A0 696 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 FBXW10Q5XX13 1052 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 SLCO6A1Q86UG4 719 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 JAMLQ86YT9 394 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 C1QL4Q86Z23 238 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 GPRASP2Q96D09 838 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 WHRNQ9P202 907 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 ACSL6Q9UKU0 697 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 ZNF214Q9UL59 606 aaPredicted RBP5.88□□□□□ -1.47
VPS50-217ENST00000485140 IRAK3Q9Y616 596 aa5.88□□□□□ -1.47
VPS50-217ENST00000485140 A0A1W2PQJ5 194 aa5.87□□□□□ -1.47
VPS50-217ENST00000485140 SRSF3P84103 164 aaKnown RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 SNW1Q13573 536 aaKnown RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 HSF5Q4G112 596 aaPredicted RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
VPS50-217ENST00000485140 CRACR2BQ8N4Y2 399 aaPredicted RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 SEC16BQ96JE7 1060 aa5.87□□□□□ -1.47
VPS50-217ENST00000485140 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 ANTXR1Q9H6X2 564 aa5.87□□□□□ -1.47
VPS50-217ENST00000485140 GP6Q9HCN6 339 aa5.87□□□□□ -1.47
VPS50-217ENST00000485140 GPR55Q9Y2T6 319 aaPredicted RBP5.87□□□□□ -1.47
VPS50-217ENST00000485140 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 N4BP3O15049 544 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 PPM1BO75688 479 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 ACRP10323 421 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 CD247P20963 164 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
VPS50-217ENST00000485140 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
VPS50-217ENST00000485140 ZNF394Q53GI3 561 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 EEF1DP3Q658K8 133 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 UNC5AQ6ZN44 842 aa5.86□□□□□ -1.47
VPS50-217ENST00000485140 MYOCOSA0A1B0GUC4 107 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 SRGAP3O43295 1099 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 RECKO95980 971 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 PRKCAP17252 672 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 PFKLP17858 780 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 CTSKP43235 329 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 ZNF143P52747 638 aaPredicted RBP5.85□□□□□ -1.47
VPS50-217ENST00000485140 CAP1Q01518 475 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 PAK2Q13177 524 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 CRTC3Q6UUV7 619 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 CABP7Q86V35 215 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 LSRQ86X29 649 aaPredicted RBP5.85□□□□□ -1.47
VPS50-217ENST00000485140 NUP43Q8NFH3 380 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 NLGN2Q8NFZ4 835 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 EBF1Q9UH73 591 aa5.85□□□□□ -1.47
VPS50-217ENST00000485140 CYBBP04839 570 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 GSTM1P09488 218 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 GJA8P48165 433 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 GIPRP48546 466 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 MAPKAPK2P49137 400 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 SLC7A5Q01650 507 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 GRB10Q13322 594 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 HEATR6Q6AI08 1181 aaKnown RBP5.84□□□□□ -1.47
VPS50-217ENST00000485140 RCSD1Q6JBY9 416 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 POMZP3Q6PJE2 187 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 FIBCD1Q8N539 461 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 SLC12A9Q9BXP2 914 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 TGIF2Q9GZN2 237 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 TNFRSF12AQ9NP84 129 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 AP5S1Q9NUS5 200 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.84□□□□□ -1.47
VPS50-217ENST00000485140 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 PCDHGB7Q9Y5F8 929 aa5.84□□□□□ -1.47
VPS50-217ENST00000485140 MEIS1O00470 390 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 FGF10O15520 208 aaPredicted RBP5.83□□□□□ -1.48
VPS50-217ENST00000485140 VIPR1P32241 457 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 CASP7P55210 303 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 ZNF445P59923 1031 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 GNPTABQ3T906 1256 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 PAQR3Q6TCH7 311 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 TTLL10Q6ZVT0 673 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 VPS37DQ86XT2 251 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 CPLX3Q8WVH0 158 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 RCC1LQ96I51 464 aaKnown RBP5.83□□□□□ -1.48
VPS50-217ENST00000485140 PDLIM7Q9NR12 457 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 MBD1Q9UIS9 605 aaPredicted RBP5.83□□□□□ -1.48
VPS50-217ENST00000485140 NUDT5Q9UKK9 219 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 PPT2Q9UMR5 302 aa5.83□□□□□ -1.48
VPS50-217ENST00000485140 C9IYK1 514 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 SHOXO15266 292 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 SASH1O94885 1247 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 RACK1P63244 317 aaKnown RBP5.82□□□□□ -1.48
VPS50-217ENST00000485140 GNL2Q13823 731 aaKnown RBP5.82□□□□□ -1.48
VPS50-217ENST00000485140 RTP2Q5QGT7 225 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 AXDND1Q5T1B0 1012 aaPredicted RBP5.82□□□□□ -1.48
VPS50-217ENST00000485140 ZC3H14Q6PJT7 736 aaKnown RBP5.82□□□□□ -1.48
VPS50-217ENST00000485140 SIRT2Q8IXJ6 389 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 SP8Q8IXZ3 490 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 MZB1Q8WU39 189 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 PTCHD1Q96NR3 888 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 HAUS7Q99871 368 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 RNF38Q9H0F5 515 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 IRF2BPLQ9H1B7 796 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms