RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 TMTC1Q8IUR5 882 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 ZNF513Q8N8E2 541 aaPredicted RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 NAA15Q9BXJ9 866 aaKnown RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 SYNRGQ9UMZ2 1314 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 GRIK3Q13003 919 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
LINC01140-206ENST00000484933 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
LINC01140-206ENST00000484933 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 PHKG2P15735 406 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 SNAP23O00161 211 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 HGSO14964 777 aaPredicted RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 PRDM1O75626 825 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 IPO7O95373 1038 aaKnown RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 TMOD1P28289 359 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 TOB1P50616 345 aaPredicted RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
LINC01140-206ENST00000484933 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
LINC01140-206ENST00000484933 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 KCNQ2O43526 872 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 NDUFA10O95299 355 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 SLC8A1P32418 973 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 CASP7P55210 303 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 PTGISQ16647 500 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 CYFIP2Q96F07 1278 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 NAPBQ9H115 298 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 PLCD1P51178 756 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 RWDD2BP57060 319 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 ZNF174Q15697 407 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 TBC1D1Q86TI0 1168 aaPredicted RBP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 TATDN2Q93075 761 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 PCMTD1Q96MG8 357 aaPredicted RBP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 OSBPL7Q9BZF2 842 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 NFU1Q9UMS0 254 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 H7C1W4 665 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
LINC01140-206ENST00000484933 MORC3Q14149 939 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 CPLX4Q7Z7G2 160 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 NOD2Q9HC29 1040 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 ABCC6O95255 1503 aa11.28□□□□□ -0.6
LINC01140-206ENST00000484933 PYGLP06737 847 aa11.27□□□□□ -0.6
LINC01140-206ENST00000484933 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.6
LINC01140-206ENST00000484933 MCAMP43121 646 aa11.27□□□□□ -0.6
LINC01140-206ENST00000484933 UBXN1Q04323 297 aa11.27□□□□□ -0.6
LINC01140-206ENST00000484933 C3orf20Q8ND61 904 aa11.27□□□□□ -0.6
LINC01140-206ENST00000484933 SPAG5Q96R06 1193 aa11.27□□□□□ -0.6
LINC01140-206ENST00000484933 FBXO2Q9UK22 296 aaPredicted RBP11.27□□□□□ -0.6
LINC01140-206ENST00000484933 DCCP43146 1447 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 DIAPH2O60879 1101 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 ANP32DO95626 131 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 IFIT5Q13325 482 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 RTN1Q16799 776 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 LACRTQ9GZZ8 138 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 PICK1Q9NRD5 415 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 A0A087X0B3 334 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 MINDY4BA8MYZ0 360 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 PRKAB2O43741 272 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 RANBP1P43487 201 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 USP4Q13107 963 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 DDB1Q16531 1140 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 QPCTQ16769 361 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 BZW1Q7L1Q6 419 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 CCDC50Q8IVM0 306 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 ANKRD13CQ8N6S4 541 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 OR2W6PQ8NHA6 318 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 AENQ8WTP8 325 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 BORCS6Q96GS4 357 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 PLIN2Q99541 437 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
LINC01140-206ENST00000484933 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
LINC01140-206ENST00000484933 GGT7Q9UJ14 662 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms