RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.39□□□□□ -0.753e-6■■■■■ 50.8
ALMS1-204ENST00000484298 ZNF653Q96CK0 615 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 BLOC1S6Q9UL45 172 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 PDE1BQ01064 536 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 SYBUQ9NX95 663 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 SUN2Q9UH99 717 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
ALMS1-204ENST00000484298 MAP4P27816 1152 aaKnown RBP10.39□□□□□ -0.75
ALMS1-204ENST00000484298 MTRQ99707 1265 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 PRPSAP1Q14558 356 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 RINLQ6ZS11 566 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 TRIM45Q9H8W5 580 aaPredicted RBP10.39□□□□□ -0.75
ALMS1-204ENST00000484298 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 LAMC2Q13753 1193 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.39□□□□□ -0.75
ALMS1-204ENST00000484298 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 CAPN1P07384 714 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 PLCG2P16885 1265 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 PSMA3P25788 255 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 FAM69CQ0P6D2 419 aa10.39□□□□□ -0.75
ALMS1-204ENST00000484298 CYLC2Q14093 348 aaPredicted RBP10.39□□□□□ -0.75
ALMS1-204ENST00000484298 PRPF6O94906 941 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 ESRRAP11474 423 aaPredicted RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 CERS3Q8IU89 383 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 TOMM70O94826 608 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 UQCRFS1P1P0C7P4 283 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 STX3Q13277 289 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SLFN5Q08AF3 891 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 YIPF3Q9GZM5 350 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 ACTN1P12814 892 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 RPN1P04843 607 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 RAPH1Q70E73 1250 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 EPAS1Q99814 870 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 NLRP4Q96MN2 994 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 PSMB7Q99436 277 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 BRD8Q9H0E9 1235 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 BATF3Q9NR55 127 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SMYD2Q9NRG4 433 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 UBAP1Q9NZ09 502 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 DNAJC6O75061 913 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 BEND3Q5T5X7 828 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 Q6ZUG5 572 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 LZTS1Q9Y250 596 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SMARCA5O60264 1052 aaPredicted RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 N4BP1O75113 896 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 HADHQ16836 314 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 ZNF212Q9UDV6 495 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
ALMS1-204ENST00000484298 TEX2Q8IWB9 1127 aa10.38□□□□□ -0.75
ALMS1-204ENST00000484298 VWA3AA6NCI4 1184 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 OATP04181 439 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 MAGEA1P43355 309 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 DCLK2Q8N568 766 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 TTLL11Q8NHH1 800 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 IPO5O00410 1097 aaKnown RBP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 GNL1P36915 607 aaPredicted RBP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 ATAD3BQ5T9A4 648 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 NCLNQ969V3 563 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 ASPSCR1Q9BZE9 553 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 HAND2P61296 217 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 KLC2Q9H0B6 622 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 ADAMTS2O95450 1211 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 NR5A1Q13285 461 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 MAML1Q92585 1016 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 KCNK3O14649 394 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 PDHA1P08559 390 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 RUNX1T1Q06455 604 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SF3A3Q12874 501 aaKnown RBP eCLIP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 NDEL1Q9GZM8 345 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 GYG2O15488 501 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
ALMS1-204ENST00000484298 OCRLQ01968 901 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 CASP10Q92851 521 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 TMCC1O94876 653 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
ALMS1-204ENST00000484298 SIKE1Q9BRV8 207 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms