RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SPTY2D1Q68D10 685 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 CCDC84Q86UT8 332 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 JAMLQ86YT9 394 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 C1QL4Q86Z23 238 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 FAM169BQ8N8A8 192 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 ZSWIM2Q8NEG5 633 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 GAL3ST3Q96A11 431 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 DIRC2Q96SL1 478 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 NSUN3Q9H649 340 aaKnown RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 TERF2IPQ9NYB0 399 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 ZSWIM5Q9P217 1185 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 PTCH2Q9Y6C5 1203 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 TSPAN6O43657 245 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 KRT1P04264 644 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 C1QTNF9P0C862 333 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 RAC2P15153 192 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 MCM4P33991 863 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 STAT3P40763 770 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 CASP7P55210 303 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 RPS26P62854 115 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 SSRP1Q08945 709 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 PPP2R5AQ15172 486 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 TM4SF20Q53R12 229 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 ZC3H12BQ5HYM0 836 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 PRAMEF13Q5VWM6 474 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 LARP1BQ659C4 914 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 WWC2Q6AWC2 1192 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 AGMOQ6ZNB7 445 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 DDX42Q86XP3 938 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 SAMD3Q8N6K7 520 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 PNISRQ8TF01 805 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 NINJ1Q92982 152 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 TSR2Q969E8 191 aaKnown RBP5.81□□□□□ -1.48
PTCD3-214ENST00000483925 LRRC3Q9BY71 257 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 TLR6Q9Y2C9 796 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 CD2APQ9Y5K6 639 aa5.81□□□□□ -1.48
PTCD3-214ENST00000483925 CCDC163A0A0D9SF12 145 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 PPFIA4O75335 1185 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 DDAH1O94760 285 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 MYL1P05976 194 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 MYCLP1P12525 358 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 CPEP16870 476 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 LMNB1P20700 586 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 GRK4P32298 578 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 CRKP46108 304 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 CDK8P49336 464 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 NFKB2Q00653 900 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 TNK2Q07912 1038 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 SEPT6Q14141 434 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 BRD3Q15059 726 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 TTF1Q15361 905 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 VPS72Q15906 364 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 LONRF2Q1L5Z9 754 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 CWF19L2Q2TBE0 894 aaKnown RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 TTC6Q86TZ1 520 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 NIM1KQ8IY84 436 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 REXO1Q8N1G1 1221 aaKnown RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 ABHD4Q8TB40 342 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 XAGE3Q8WTP9 111 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 DCP1AQ9NPI6 582 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-214ENST00000483925 SLAMF8Q9P0V8 285 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 TACC3Q9Y6A5 838 aa5.8□□□□□ -1.48
PTCD3-214ENST00000483925 GJB6O95452 261 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 PAX3P23760 479 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 MPP2Q14168 576 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 ZRSR2Q15696 482 aaKnown RBP5.79□□□□□ -1.48
PTCD3-214ENST00000483925 PPP4R4Q6NUP7 873 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 TMPRSS7Q7RTY8 843 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 CDH24Q86UP0 819 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 THNSL2Q86YJ6 484 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 RBBP8NLQ8NC74 664 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-214ENST00000483925 PIWIL2Q8TC59 973 aaKnown RBP5.79□□□□□ -1.48
PTCD3-214ENST00000483925 SLC26A8Q96RN1 970 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 PFDN2Q9UHV9 154 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
PTCD3-214ENST00000483925 WASHC2CQ9Y4E1 1318 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 GFRA2O00451 464 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
PTCD3-214ENST00000483925 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-214ENST00000483925 PPP2R5EQ16537 467 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 ZFYVE27Q5T4F4 411 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 EVI5LQ96CN4 794 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 MPHOSPH6Q99547 160 aaKnown RBP5.78□□□□□ -1.48
PTCD3-214ENST00000483925 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 MAF1Q9H063 256 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 EPB41L4BQ9H329 900 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 ZNRF3Q9ULT6 936 aa5.78□□□□□ -1.48
PTCD3-214ENST00000483925 DNAJC25-GNG10A0A024R161 153 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 TLR3O15455 904 aaKnown RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 RFPL3O75679 317 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 RASGRP1O95267 797 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 LDHAP00338 332 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms