RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 QRICH1Q2TAL8 776 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 SPICE1Q8N0Z3 855 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
RXRB-205ENST00000483821 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
RXRB-205ENST00000483821 M0R2N6 131 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 CTAGE5O15320 804 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 FDX1P10109 184 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 ATP2B1P20020 1258 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 FAM160A1Q05DH4 1040 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 TPRNQ4KMQ1 711 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
RXRB-205ENST00000483821 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 COA7Q96BR5 231 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
RXRB-205ENST00000483821 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 PRR12Q9ULL5 1215 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 MYH15Q9Y2K3 1946 aa15.31■□□□□ 0.04
RXRB-205ENST00000483821 LAD1O00515 517 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
RXRB-205ENST00000483821 PTPRAP18433 802 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 BACE1P56817 501 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 PRAMEF18Q5VWM3 479 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
RXRB-205ENST00000483821 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
RXRB-205ENST00000483821 FAM13BQ9NYF5 915 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 PCDHB6Q9Y5E3 794 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 SRPRBQ9Y5M8 271 aaKnown RBP15.3■□□□□ 0.04
RXRB-205ENST00000483821 CSADQ9Y600 493 aa15.3■□□□□ 0.04
RXRB-205ENST00000483821 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 SOCS7O14512 581 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 USP2O75604 605 aaPredicted RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 LIG1P18858 919 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 PTPREP23469 700 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 SPP2Q13103 211 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 ZNF174Q15697 407 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 AXDND1Q5T1B0 1012 aaPredicted RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.29■□□□□ 0.04
RXRB-205ENST00000483821 SLF1Q9BQI6 1058 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 CTDP1Q9Y5B0 961 aaPredicted RBP15.29■□□□□ 0.04
RXRB-205ENST00000483821 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
RXRB-205ENST00000483821 PPP1R11O60927 126 aaPredicted RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 NEK8Q86SG6 692 aa15.28■□□□□ 0.04
RXRB-205ENST00000483821 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 KIFC2Q96AC6 838 aa15.28■□□□□ 0.04
RXRB-205ENST00000483821 CCDC34Q96HJ3 373 aa15.28■□□□□ 0.04
RXRB-205ENST00000483821 TNMDQ9H2S6 317 aa15.28■□□□□ 0.04
RXRB-205ENST00000483821 RANBP17Q9H2T7 1088 aaKnown RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 CLSTN2Q9H4D0 955 aa15.28■□□□□ 0.04
RXRB-205ENST00000483821 BIN2Q9UBW5 565 aaPredicted RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
RXRB-205ENST00000483821 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 ADM5C9JUS6 153 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 ATP2C1P98194 919 aaPredicted RBP15.27■□□□□ 0.04
RXRB-205ENST00000483821 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 MTMR2Q13614 643 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 MAP3K11Q16584 847 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 INF2Q27J81 1249 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 KIAA1755Q5JYT7 1200 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 RESP18Q5W5W9 173 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
RXRB-205ENST00000483821 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
RXRB-205ENST00000483821 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
RXRB-205ENST00000483821 HOOK1Q9UJC3 728 aaKnown RBP15.27■□□□□ 0.04
RXRB-205ENST00000483821 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.04
RXRB-205ENST00000483821 ABCB11O95342 1321 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 FAM237AA0A1B0GTK4 181 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 SYCE3A1L190 88 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 UNCXA6NJT0 531 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 ZBED4O75132 1171 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 NR1I2O75469 434 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 MCM7P33993 719 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 PTGDRQ13258 359 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 ANKRD13AQ8IZ07 590 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 SAMD3Q8N6K7 520 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 ENGASEQ8NFI3 743 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 CDCA5Q96FF9 252 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 TIGD1Q96MW7 591 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 TANGO6Q9C0B7 1094 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms