RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
MRPL28-210ENST00000483764 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
MRPL28-210ENST00000483764 BAZ2BQ9UIF8 2168 aaKnown RBP19.69■□□□□ 0.74
MRPL28-210ENST00000483764 GOLGA6L4A6NEF3 574 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 KIF23Q02241 960 aaPredicted RBP19.69■□□□□ 0.74
MRPL28-210ENST00000483764 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 FAM177A1Q8N128 213 aaPredicted RBP19.69■□□□□ 0.74
MRPL28-210ENST00000483764 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 OTUD5Q96G74 571 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 GDPD2Q9HCC8 539 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 CCDC39Q9UFE4 941 aa19.69■□□□□ 0.74
MRPL28-210ENST00000483764 hCG_1984214I3L0E3 225 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 STXBP3O00186 592 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 CAVIN2O95810 425 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 NLRP5P59047 1200 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 QRICH1Q2TAL8 776 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 FOXD4L6Q3SYB3 417 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 FOXD4L3Q6VB84 417 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 ZNF713Q8N859 430 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 RPAP3Q9H6T3 665 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
MRPL28-210ENST00000483764 FBXO28Q9NVF7 368 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 MYH15Q9Y2K3 1946 aa19.68■□□□□ 0.74
MRPL28-210ENST00000483764 CXCL11O14625 94 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 IRF6O14896 467 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 PPIL2Q13356 520 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 GNL2Q13823 731 aaKnown RBP19.67■□□□□ 0.74
MRPL28-210ENST00000483764 TYW1BQ6NUM6 668 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 DIS3L2Q8IYB7 885 aaKnown RBP19.67■□□□□ 0.74
MRPL28-210ENST00000483764 CCDC148Q8NFR7 591 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 CCDC12Q8WUD4 166 aaPredicted RBP19.67■□□□□ 0.74
MRPL28-210ENST00000483764 KIFC2Q96AC6 838 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 CHAMP1Q96JM3 812 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 SPATA32Q96LK8 384 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 ZNF396Q96N95 335 aaPredicted RBP19.67■□□□□ 0.74
MRPL28-210ENST00000483764 TANGO6Q9C0B7 1094 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 RRAGDQ9NQL2 400 aaPredicted RBP19.67■□□□□ 0.74
MRPL28-210ENST00000483764 OTOFQ9HC10 1997 aa19.67■□□□□ 0.74
MRPL28-210ENST00000483764 BTBD18B2RXH4 712 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 PPP1R11O60927 126 aaPredicted RBP19.66■□□□□ 0.74
MRPL28-210ENST00000483764 U2AF2P26368 475 aaKnown RBP eCLIP19.66■□□□□ 0.74
MRPL28-210ENST00000483764 CALML3P27482 149 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 NAPAP54920 295 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 CST9Q5W186 159 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 BRAPQ7Z569 592 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 PRPF38AQ8NAV1 312 aaKnown RBP19.66■□□□□ 0.74
MRPL28-210ENST00000483764 FOXP1Q9H334 677 aaPredicted RBP19.66■□□□□ 0.74
MRPL28-210ENST00000483764 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 KIF28PB7ZC32 967 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 KIF3CO14782 793 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 CCDC192P0DO97 292 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 MSNP26038 577 aaKnown RBP19.66■□□□□ 0.74
MRPL28-210ENST00000483764 KRT2P35908 639 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 SNAP25P60880 206 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 FAM173BQ6P4H8 233 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 COA7Q96BR5 231 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 KCNH4Q9UQ05 1017 aa19.66■□□□□ 0.74
MRPL28-210ENST00000483764 MYH6P13533 1939 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 FLOT1O75955 427 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 NPY5RQ15761 445 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 GALNT17Q6IS24 598 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 SAMD1Q6SPF0 538 aaPredicted RBP19.65■□□□□ 0.74
MRPL28-210ENST00000483764 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
MRPL28-210ENST00000483764 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
MRPL28-210ENST00000483764 SMCO2A6NFE2 343 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 PPP1R18Q6NYC8 613 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
MRPL28-210ENST00000483764 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 NOSTRINQ8IVI9 506 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 LEO1Q8WVC0 666 aaPredicted RBP19.64■□□□□ 0.73
MRPL28-210ENST00000483764 ZMYND12Q9H0C1 365 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 RANBP17Q9H2T7 1088 aaKnown RBP19.64■□□□□ 0.73
MRPL28-210ENST00000483764 C6orf50Q9HD87 102 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 PPP1R9AQ9ULJ8 1098 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 NOL7Q9UMY1 257 aaKnown RBP19.64■□□□□ 0.73
MRPL28-210ENST00000483764 PCDHA4Q9UN74 947 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 PCDHA1Q9Y5I3 950 aa19.64■□□□□ 0.73
MRPL28-210ENST00000483764 ESYT2A0FGR8 921 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L15C9J2P7 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L13C9JLJ4 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L11C9JVI0 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L18D6R9N7 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L22D6RA61 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L17D6RBQ6 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L19D6RCP7 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L20D6RJB6 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 CTAGE5O15320 804 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 GNA11P29992 359 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 USP17L24Q0WX57 530 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 TRAF1Q13077 416 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 NR5A1Q13285 461 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 BLIDQ8IZY5 108 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 NUP62CLQ9H1M0 184 aa19.63■□□□□ 0.73
MRPL28-210ENST00000483764 GJA5P36382 358 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms