RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 BCRP11274 1271 aa23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 CDC37Q16543 378 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 FAM110CQ1W6H9 321 aa23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 SLC35G1Q2M3R5 365 aa23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 Q3C1V9 767 aa23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 RANBP17Q9H2T7 1088 aaKnown RBP23.11■■□□□ 1.29
TRAPPC12-220ENST00000482645 NID2Q14112 1375 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 CPLX1O14810 134 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 TAL1P17542 331 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 SCRN1Q12765 414 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 PPP2R5BQ15173 497 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 REPS2Q8NFH8 660 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 ZSCAN31Q96LW9 406 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 PIGSQ96S52 555 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 SPATC1LQ9H0A9 340 aa23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 SH2B1Q9NRF2 756 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 DAXXQ9UER7 740 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC12-220ENST00000482645 hCG_1642624A0A1W2PR95 340 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 GPR25O00155 361 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 FOXN1O15353 648 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 PFKFB2O60825 505 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 FDX1P10109 184 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 WDR78Q5VTH9 848 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 SNRNP48Q6IEG0 339 aaKnown RBP23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 CCAR1Q8IX12 1150 aaKnown RBP23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 IPO9Q96P70 1041 aaKnown RBP23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 SPZ1Q9BXG8 430 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 RIOX1Q9H6W3 641 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 MORF4L1Q9UBU8 362 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 ZNF214Q9UL59 606 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 MYH6P13533 1939 aa23.09■■□□□ 1.29
TRAPPC12-220ENST00000482645 QRICH1Q2TAL8 776 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 USH1GQ495M9 461 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 CCDC83Q8IWF9 413 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 AGBL1Q96MI9 1066 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 TEX13BQ9BXU2 312 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 HOMER2Q9NSB8 354 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 CCPG1Q9ULG6 757 aa23.08■■□□□ 1.29
TRAPPC12-220ENST00000482645 DTNBO60941 627 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 STAT3P40763 770 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 CCNA1P78396 465 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 SP3Q02447 781 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 NCAPG2Q86XI2 1143 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 PHKBQ93100 1093 aa23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 RRP36Q96EU6 259 aaKnown RBP23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 MOV10L1Q9BXT6 1211 aaKnown RBP23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 CWC22Q9HCG8 908 aaKnown RBP23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 SEC63Q9UGP8 760 aaKnown RBP23.08■■□□□ 1.28
TRAPPC12-220ENST00000482645 ZNF536O15090 1300 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 CNTNAP5Q8WYK1 1306 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 HSP90AA1P07900 732 aaKnown RBP23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 ST3GAL1Q11201 340 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 CPLX2Q6PUV4 134 aaKnown RBP23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 ZNF296Q8WUU4 475 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 GTF3C6Q969F1 213 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 PORCNQ9H237 461 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 FOXD4L1Q9NU39 408 aa23.07■■□□□ 1.28
TRAPPC12-220ENST00000482645 ZBTB5O15062 677 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 ICAM1P05362 532 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 ALAS1P13196 640 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 SMARCA1P28370 1054 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 OAZ1P54368 228 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 EFCC1Q9HA90 598 aa23.06■■□□□ 1.28
TRAPPC12-220ENST00000482645 FKTNO75072 461 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 ERCC3P19447 782 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 LACTBP83111 547 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 FUT2Q10981 343 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 FBXO11Q86XK2 927 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 CD99L2Q8TCZ2 262 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 SLC26A6Q9BXS9 759 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 V9GY48 417 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC12-220ENST00000482645 PNMA6FA0A0J9YX94 578 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 ATP2A1O14983 1001 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 HSPA8P11142 646 aaKnown RBP23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 AKAP17AQ02040 695 aaKnown RBP23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 KIF22Q14807 665 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 NTRK3Q16288 839 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 RIOX2Q8IUF8 465 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 ARHGAP39Q9C0H5 1083 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 ZSWIM8A7E2V4 1837 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 SMCHD1A6NHR9 2005 aa23.04■■□□□ 1.28
TRAPPC12-220ENST00000482645 PPP1R11O60927 126 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 IFNAR1P17181 557 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 LBX1P52954 281 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 AMNQ9BXJ7 453 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 CDKL5O76039 1030 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 FMNL1O95466 1100 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 PSMC4P43686 418 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 SSRP1Q08945 709 aaKnown RBP23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 CUL4AQ13619 759 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 TRIM22Q8IYM9 498 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 TRERF1Q96PN7 1200 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 RNF146Q9NTX7 359 aa23.03■■□□□ 1.28
TRAPPC12-220ENST00000482645 TNPO2O14787 897 aaKnown RBP23.02■■□□□ 1.28
TRAPPC12-220ENST00000482645 SLC25A27O95847 323 aa23.02■■□□□ 1.28
TRAPPC12-220ENST00000482645 CTGFP29279 349 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms