RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
SPTLC1-206ENST00000482632 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
SPTLC1-206ENST00000482632 ELNP15502 786 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 CYP2B6P20813 491 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 SART3Q15020 963 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 LBX2Q6XYB7 198 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 GPR142Q7Z601 462 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 CHURC1Q8WUH1 139 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 MOV10L1Q9BXT6 1211 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 PLXNA1Q9UIW2 1896 aa11.72□□□□□ -0.53
SPTLC1-206ENST00000482632 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 VWA5AO00534 786 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 ADCY3O60266 1144 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 REC8O95072 547 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 ERCC3P19447 782 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 GRK4P32298 578 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 SLC16A2P36021 539 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 SNAP25P60880 206 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 WTAPQ15007 396 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 CCDC174Q6PII3 467 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 STOX1Q6ZVD7 989 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 FAM160B2Q86V87 743 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 TTC14Q96N46 770 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
SPTLC1-206ENST00000482632 GOLGA8HP0CJ92 632 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 PDHBP11177 359 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 STAT3P40763 770 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 NT5C2P49902 561 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 TMEM67Q5HYA8 995 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-206ENST00000482632 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 PRC1O43663 620 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 ST18O60284 1047 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 SLC25A27O95847 323 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 RGS2P41220 211 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 UBXN2AP68543 259 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 SYDE2Q5VT97 1194 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 MMP19Q99542 508 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
SPTLC1-206ENST00000482632 SLC15A5A6NIM6 579 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 INHAP05111 366 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 PARP1P09874 1014 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 FCER1AP12319 257 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 ALAS1P13196 640 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 PTPREP23469 700 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 ADORA2AP29274 412 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 MCM5P33992 734 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 NOVP48745 357 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 FGD1P98174 961 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 ZNF543Q08ER8 600 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 MB21D2Q8IYB1 491 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 SHCBP1Q8NEM2 672 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 NUP133Q8WUM0 1156 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 APBA2Q99767 749 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 MROH8Q9H579 483 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 SLC38A10Q9HBR0 1119 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-206ENST00000482632 CCDC69A6NI79 296 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 TAL1P17542 331 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 COPB2P35606 906 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ANTXR2P58335 489 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 KRT32Q14532 448 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 KCTD2Q14681 263 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 MTFR1Q15390 333 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 SEC23AQ15436 765 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ASPRV1Q53RT3 343 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 MORN1Q5T089 497 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 GPATCH4Q5T3I0 446 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 TMEM92Q6UXU6 159 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms