RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ANKRD34BA5PLL1 514 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 B2RBV5 119 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 TP53P04637 393 aaPredicted RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 IFRD2Q12894 506 aaPredicted RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 AUHQ13825 339 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 DHX8Q14562 1220 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 NBPF9Q3BBW0 867 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 AXDND1Q5T1B0 1012 aaPredicted RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 TDRD10Q5VZ19 366 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 HEATR6Q6AI08 1181 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 C7orf61Q8IZ16 206 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 AGBL5Q8NDL9 886 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 PIWIL2Q8TC59 973 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 HAUS7Q99871 368 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 CHST12Q9NRB3 414 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 ZC3H7BQ9UGR2 993 aaKnown RBP5.26□□□□□ -1.57
VPS41-212ENST00000482217 TCEAL9Q9UHQ7 104 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 PCDHB12Q9Y5F1 795 aa5.26□□□□□ -1.57
VPS41-212ENST00000482217 CNTNAP4Q9C0A0 1308 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 A0A087WZG4 1122 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 FAM221BA6H8Z2 402 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 SUSD5O60279 629 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 ADAMTS4O75173 837 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 LDHAP00338 332 aaKnown RBP5.25□□□□□ -1.57
VPS41-212ENST00000482217 OXCT1P55809 520 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 ODR4Q5SWX8 454 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 DCAF15Q66K64 600 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 MCTP1Q6DN14 999 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 MFSD4AQ8N468 514 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 DTWD2Q8NBA8 298 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 NETO1Q8TDF5 533 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 Q96M66 194 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 APBA2Q99767 749 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 KLHL25Q9H0H3 589 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 GBP3Q9H0R5 595 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 SWAP70Q9UH65 585 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 SLC5A6Q9Y289 635 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 CAPN6Q9Y6Q1 641 aa5.25□□□□□ -1.57
VPS41-212ENST00000482217 IQCA1LA6NCM1 817 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 CCDC85CA6NKD9 419 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 CBFA2T2O43439 604 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 PPM1BO75688 479 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 CBX7O95931 251 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 EPHX1P07099 455 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
VPS41-212ENST00000482217 ITGA4P13612 1032 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 CD247P20963 164 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 ARHGAP27Q6ZUM4 889 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 ENOX1Q8TC92 643 aaKnown RBP5.24□□□□□ -1.57
VPS41-212ENST00000482217 C8orf48Q96LL4 319 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 RNPC3Q96LT9 517 aaKnown RBP5.24□□□□□ -1.57
VPS41-212ENST00000482217 ASCC2Q9H1I8 757 aaPredicted RBP5.24□□□□□ -1.57
VPS41-212ENST00000482217 GP6Q9HCN6 339 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 FAM86C1Q9NVL1 165 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 WHRNQ9P202 907 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 SUSD2Q9UGT4 822 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 FBXL21Q9UKT6 434 aa5.24□□□□□ -1.57
VPS41-212ENST00000482217 FAM155AB1AL88 458 aaPredicted RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 AGRPO00253 132 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 ENPP3O14638 875 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 SHOXO15266 292 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 LRRN2O75325 713 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 FGAP02671 866 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 TNK2Q07912 1038 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 IFI16Q16666 785 aaKnown RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 SLC10A6Q3KNW5 377 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 GET4Q7L5D6 327 aaPredicted RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 TP53INP2Q8IXH6 220 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 FTSJ3Q8IY81 847 aaKnown RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 FLCNQ8NFG4 579 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 RCC1LQ96I51 464 aaKnown RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 MPHOSPH6Q99547 160 aaKnown RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 GPR62Q9BZJ7 368 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 INO80BQ9C086 356 aaPredicted RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 PRDM14Q9GZV8 571 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 TRIT1Q9H3H1 467 aaKnown RBP5.23□□□□□ -1.57
VPS41-212ENST00000482217 VAV3Q9UKW4 847 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 ZNF451Q9Y4E5 1061 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 FHOD1Q9Y613 1164 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 EID1Q9Y6B2 187 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 RPGRIP1LQ68CZ1 1315 aa5.23□□□□□ -1.57
VPS41-212ENST00000482217 TMEM265A0A087WTH1 108 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 PRR33A8MZF0 331 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 SIGLEC6O43699 453 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 CEACAM5P06731 702 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 SRFP11831 508 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 CD53P19397 219 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 GNALP38405 381 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 CLCN7P51798 805 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 PRKCQQ04759 706 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 NMIQ13287 307 aaPredicted RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 NKPD1Q17RQ9 610 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 CCDC96Q2M329 555 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 SV2CQ496J9 727 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms