RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-220ENST00000482195 GBF1Q92538 1859 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 ZNF865P0CJ78 1059 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-220ENST00000482195 EPHB4P54760 987 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-220ENST00000482195 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 HAUS7Q99871 368 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 MKNK2Q9HBH9 465 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-220ENST00000482195 DDX19BQ9UMR2 479 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
DDX39B-220ENST00000482195 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 TTC28Q96AY4 2481 aa12.35□□□□□ -0.43
DDX39B-220ENST00000482195 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
DDX39B-220ENST00000482195 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 KIAA0355O15063 1070 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-220ENST00000482195 ATP5JP18859 108 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 ACLYP53396 1101 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 PUS7LQ9H0K6 701 aaKnown RBP12.34□□□□□ -0.43
DDX39B-220ENST00000482195 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
DDX39B-220ENST00000482195 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 ZBED4O75132 1171 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 ADAMTS4O75173 837 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 DNAJB2P25686 324 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
DDX39B-220ENST00000482195 SPC25Q9HBM1 224 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
DDX39B-220ENST00000482195 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
DDX39B-220ENST00000482195 NDUFB10O96000 172 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 TDO2P48775 406 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 FAAP100Q0VG06 881 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 KCNA10Q16322 511 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
DDX39B-220ENST00000482195 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
DDX39B-220ENST00000482195 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
DDX39B-220ENST00000482195 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
DDX39B-220ENST00000482195 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 PRDM1O75626 825 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 TIMP1P01033 207 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 RASA1P20936 1047 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 PPIGQ13427 754 aaKnown RBP eCLIP12.31□□□□□ -0.446e-13■□□□□ 10.6
DDX39B-220ENST00000482195 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 NOL8Q76FK4 1167 aaKnown RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 ANKRD33Q7Z3H0 272 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 TIFAQ96CG3 184 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.449e-25■□□□□ 9.5
DDX39B-220ENST00000482195 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-220ENST00000482195 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
DDX39B-220ENST00000482195 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 F5H6K3 240 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 GPR37O15354 613 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 SNAI1O95863 264 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 APPP05067 770 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 ASGR1P07306 291 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 KLRC3Q07444 240 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 KLHDC9Q8NEP7 349 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
DDX39B-220ENST00000482195 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
DDX39B-220ENST00000482195 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms