RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ST7Q9NRC1 585 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
C9orf3-218ENST00000482056 MAPK8IP1Q9UQF2 711 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 JAG2Q9Y219 1238 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 IRS2Q9Y4H2 1338 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 GNPATO15228 680 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 CDC25AP30304 524 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 OR8K1Q8NGG5 319 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-218ENST00000482056 EPC1Q9H2F5 836 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 LUC7L2Q9Y383 392 aaKnown RBP17.26■□□□□ 0.35
C9orf3-218ENST00000482056 MYH1P12882 1939 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 BICDL2A1A5D9 508 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
C9orf3-218ENST00000482056 TUBBP07437 444 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 KCNQ4P56696 695 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 FAM114A1Q8IWE2 563 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 KBTBD4Q9NVX7 518 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
C9orf3-218ENST00000482056 STX8Q9UNK0 236 aa17.25■□□□□ 0.35
C9orf3-218ENST00000482056 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
C9orf3-218ENST00000482056 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 TM4SF1P30408 202 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 DNM2P50570 870 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 GPS2Q13227 327 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 SPZ1Q9BXG8 430 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 TMEM60Q9H2L4 133 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 C6orf50Q9HD87 102 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 EPN1Q9Y6I3 576 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 CTAGE15A4D2H0 777 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 OR52Z1P0C646 297 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 CTAGE8P0CG41 777 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 GNA11P29992 359 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 AMPD3Q01432 767 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 NONOQ15233 471 aaKnown RBP eCLIP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 FAM98CQ17RN3 349 aaKnown RBP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 TYW1BQ6NUM6 668 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 CTAGE6Q86UF2 777 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 CABP7Q86V35 215 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 CTAGE4Q8IX94 777 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 TGFBRAP1Q8WUH2 860 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 HNRNPLLQ8WVV9 542 aaKnown RBP17.24■□□□□ 0.35
C9orf3-218ENST00000482056 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 NUP58Q9BVL2 599 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
C9orf3-218ENST00000482056 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 KLRF2D3W0D1 207 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 NDUFA10O95299 355 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 NAPAP54920 295 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 ORC2Q13416 577 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-218ENST00000482056 GRAPQ13588 217 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 SMC1AQ14683 1233 aaKnown RBP17.23■□□□□ 0.35
C9orf3-218ENST00000482056 LONRF2Q1L5Z9 754 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 GRAPLQ8TC17 118 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-218ENST00000482056 DNAJC7Q99615 494 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 UBXN6Q9BZV1 441 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 ZMYND12Q9H0C1 365 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 GBP3Q9H0R5 595 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 EXOC1Q9NV70 894 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
C9orf3-218ENST00000482056 CAPN11Q9UMQ6 739 aa17.23■□□□□ 0.35
C9orf3-218ENST00000482056 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 KLRC4O43908 158 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 KRT83P78385 493 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 IRF2BP1Q8IU81 584 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 RETREG2Q8NC44 543 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 RRP36Q96EU6 259 aaKnown RBP17.22■□□□□ 0.35
C9orf3-218ENST00000482056 ZNHIT6Q9NWK9 470 aaKnown RBP17.22■□□□□ 0.35
C9orf3-218ENST00000482056 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 TTC26A0AVF1 554 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 CYTH3O43739 400 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 SASH3O75995 380 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 PLCG2P16885 1265 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 RASA1P20936 1047 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 SMARCA1P28370 1054 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 ARHGAP25P42331 645 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 ZNF507Q8TCN5 953 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 FUT8Q9BYC5 575 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
C9orf3-218ENST00000482056 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-218ENST00000482056 POLR3GO15318 223 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-218ENST00000482056 OAS2P29728 719 aaKnown RBP17.21■□□□□ 0.35
C9orf3-218ENST00000482056 CYP2C19P33261 490 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms