RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 KCTD13Q8WZ19 329 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 IER2Q9BTL4 223 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 VAV3Q9UKW4 847 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 GPR55Q9Y2T6 319 aaPredicted RBP12.7□□□□□ -0.38
CUL3-209ENST00000481135 TBX1O43435 398 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 SNRPB2P08579 225 aaKnown RBP12.69□□□□□ -0.38
CUL3-209ENST00000481135 KCNJ6P48051 423 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 PRKCQQ04759 706 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 DPY19L1Q2PZI1 675 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 GAB4Q2WGN9 574 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 RNF112Q9ULX5 631 aa12.69□□□□□ -0.38
CUL3-209ENST00000481135 SYPP08247 313 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 VAV1P15498 845 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 SUMO1P63165 101 aaKnown RBP12.68□□□□□ -0.38
CUL3-209ENST00000481135 AOC3Q16853 763 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 FEZ1Q99689 392 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 TCFL5Q9UL49 500 aa12.68□□□□□ -0.38
CUL3-209ENST00000481135 DNAJC25-GNG10A0A024R161 153 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 COBLO75128 1261 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 ASMTLO95671 621 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 CAPNS1P04632 268 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 HOXA10P31260 410 aaPredicted RBP12.67□□□□□ -0.38
CUL3-209ENST00000481135 L1CAMP32004 1257 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 GRIA2P42262 883 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 FAM209AQ5JX71 171 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
CUL3-209ENST00000481135 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
CUL3-209ENST00000481135 MRPS23Q9Y3D9 190 aaKnown RBP12.67□□□□□ -0.38
CUL3-209ENST00000481135 GFRA1P56159 465 aa12.66□□□□□ -0.38
CUL3-209ENST00000481135 MAP4K2Q12851 820 aa12.66□□□□□ -0.38
CUL3-209ENST00000481135 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
CUL3-209ENST00000481135 SYTL4Q96C24 671 aaPredicted RBP12.66□□□□□ -0.38
CUL3-209ENST00000481135 EXOC2Q96KP1 924 aa12.66□□□□□ -0.38
CUL3-209ENST00000481135 ATP13A1Q9HD20 1204 aa12.66□□□□□ -0.38
CUL3-209ENST00000481135 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
CUL3-209ENST00000481135 AURKAO14965 403 aa12.65□□□□□ -0.38
CUL3-209ENST00000481135 ZNF205O95201 554 aa12.65□□□□□ -0.38
CUL3-209ENST00000481135 SCG5P05408 212 aa12.65□□□□□ -0.38
CUL3-209ENST00000481135 FOXB2Q5VYV0 432 aa12.65□□□□□ -0.38
CUL3-209ENST00000481135 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
CUL3-209ENST00000481135 KISS1RQ969F8 398 aaPredicted RBP12.65□□□□□ -0.38
CUL3-209ENST00000481135 FOXP3Q9BZS1 431 aa12.65□□□□□ -0.38
CUL3-209ENST00000481135 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 STXBP3O00186 592 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 ECI1P42126 302 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 SEPHS1P49903 392 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 SCRN1Q12765 414 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 FCRL3Q96P31 734 aaPredicted RBP12.64□□□□□ -0.39
CUL3-209ENST00000481135 SLC12A9Q9BXP2 914 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 TMX1Q9H3N1 280 aa12.64□□□□□ -0.39
CUL3-209ENST00000481135 GSTM1P09488 218 aa12.63□□□□□ -0.39
CUL3-209ENST00000481135 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
CUL3-209ENST00000481135 EGR3Q06889 387 aa12.63□□□□□ -0.39
CUL3-209ENST00000481135 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
CUL3-209ENST00000481135 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
CUL3-209ENST00000481135 PCDHA11Q9Y5I1 949 aa12.63□□□□□ -0.39
CUL3-209ENST00000481135 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
CUL3-209ENST00000481135 DLX3O60479 287 aa12.62□□□□□ -0.39
CUL3-209ENST00000481135 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
CUL3-209ENST00000481135 PLD2O14939 933 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 IKZF1Q13422 519 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 COPS5Q92905 334 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 CDADC1Q9BWV3 514 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
CUL3-209ENST00000481135 NCOA5Q9HCD5 579 aaKnown RBP12.61□□□□□ -0.39
CUL3-209ENST00000481135 SLC5A6Q9Y289 635 aa12.61□□□□□ -0.39
CUL3-209ENST00000481135 TRBV23OR9-2A0A075B6M9 112 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 ESR1P03372 595 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 IFNGR1P15260 489 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 SF1Q15637 639 aaKnown RBP12.6□□□□□ -0.39
CUL3-209ENST00000481135 MCMBPQ9BTE3 642 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
CUL3-209ENST00000481135 PPP1R12AO14974 1030 aaPredicted RBP12.59□□□□□ -0.39
CUL3-209ENST00000481135 FKTNO75072 461 aa12.59□□□□□ -0.39
CUL3-209ENST00000481135 APPP05067 770 aa12.59□□□□□ -0.39
CUL3-209ENST00000481135 FNDC3BQ53EP0 1204 aaKnown RBP12.59□□□□□ -0.39
CUL3-209ENST00000481135 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
CUL3-209ENST00000481135 NAT16Q8N8M0 369 aa12.59□□□□□ -0.39
CUL3-209ENST00000481135 THBDP07204 575 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
CUL3-209ENST00000481135 GABREP78334 506 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 TKFCQ3LXA3 575 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 RTP2Q5QGT7 225 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
CUL3-209ENST00000481135 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 AP5S1Q9NUS5 200 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 PRKAB1Q9Y478 270 aa12.58□□□□□ -0.4
CUL3-209ENST00000481135 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms