RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TMEM154Q6P9G4 183 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 SYT2Q8N9I0 419 aaPredicted RBP11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 TIPINQ9BVW5 301 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 FTOQ9C0B1 505 aaKnown RBP eCLIP11.44□□□□□ -0.587e-6■■□□□ 12.9
PRPF4B-206ENST00000481109 MIS12Q9H081 205 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 SYNCQ9H7C4 482 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 INIPQ9NRY2 104 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 PRPF3O43395 683 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 SUPT3HO75486 399 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 SEC24CP53992 1094 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CNGA3Q16281 694 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 MLKLQ8NB16 471 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 UHMK1Q8TAS1 419 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 GIMAP1Q8WWP7 306 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CARD9Q9H257 536 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 TBCCD1Q9NVR7 557 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 PTPRTO14522 1441 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 TRAPPC3O43617 180 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 NDUFB5O43674 189 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 MYBL1P10243 752 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 VARSP26640 1264 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 PMS2P54278 862 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 PDE1AP54750 535 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 GEMIN4P57678 1058 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 ITGA7Q13683 1181 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC153Q494R4 210 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 ZNF569Q5MCW4 686 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 NEPROQ6NW34 567 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 C3orf62Q6ZUJ4 267 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 TC2NQ8N9U0 490 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 SLC43A3Q8NBI5 491 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CAVIN3Q969G5 261 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CLMNQ96JQ2 1002 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 DKK3Q9UBP4 350 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CARD8Q9Y2G2 431 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 TIMM22Q9Y584 194 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 UGGT1Q9NYU2 1555 aa11.43□□□□□ -0.58
PRPF4B-206ENST00000481109 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 HMGB1P1B2RPK0 211 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 PAEPP09466 180 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 COPB2P35606 906 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 MTTPP55157 894 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 PDE1BQ01064 536 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 CKAP4Q07065 602 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 EIF2B5Q13144 721 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 GKAP1Q5VSY0 366 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 ATP6V0A1Q93050 837 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 CATSPER2Q96P56 530 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 RPS6KC1Q96S38 1066 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 SLC39A3Q9BRY0 314 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 SCOCQ9UIL1 159 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 TTF2Q9UNY4 1162 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 ATP10DQ9P241 1426 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 UNCXA6NJT0 531 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 SART1O43290 800 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 MGEA5O60502 916 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 BBOX1O75936 387 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 TRIM37O94972 964 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 CFAP61Q8NHU2 1237 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 IFT81Q8WYA0 676 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 SNX14Q9Y5W7 946 aa11.42□□□□□ -0.58
PRPF4B-206ENST00000481109 KDM5AP29375 1690 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 PORP16435 677 aaPredicted RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 NLRP12P59046 1061 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 MRPS25P82663 173 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 ADALQ6DHV7 355 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 RUFY4Q6ZNE9 571 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 RASGRP2Q7LDG7 609 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 SLC7A5P1Q8MH63 180 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TRPC4APQ8TEL6 797 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 HIC2Q96JB3 615 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 NACAP1Q9BZK3 213 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 PDP2Q9P2J9 529 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 MAGEC2Q9UBF1 373 aaPredicted RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 BCL9O00512 1426 aa11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 CDK12Q9NYV4 1490 aaPredicted RBP11.41□□□□□ -0.58
PRPF4B-206ENST00000481109 TRPM2O94759 1503 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms