RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 SDR42E1Q8WUS8 393 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 MCM9Q9NXL9 1143 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-211ENST00000479625 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 LCTP09848 1927 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
GPNMB-211ENST00000479625 SLC25A27O95847 323 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 ASGR1P07306 291 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 C6orf222P0C671 652 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-211ENST00000479625 BMP1P13497 986 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 TRIM27P14373 513 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 CDK7P50613 346 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 RABGGTBP53611 331 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 RAB30Q15771 203 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 TMEM199Q8N511 208 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 EAF2Q96CJ1 260 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-211ENST00000479625 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 C1QTNF1Q9BXJ1 281 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 MSRAQ9UJ68 235 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 MROH7Q68CQ1 1323 aa11.76□□□□□ -0.53
GPNMB-211ENST00000479625 PRRC2BQ5JSZ5 2229 aaKnown RBP11.75□□□□□ -0.53
GPNMB-211ENST00000479625 IGSF3O75054 1194 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 SURF6O75683 361 aaKnown RBP11.75□□□□□ -0.53
GPNMB-211ENST00000479625 BCAR3O75815 825 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 SNAI1O95863 264 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-211ENST00000479625 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-211ENST00000479625 MYOGP15173 224 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 REPS2Q8NFH8 660 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 LRFN3Q9BTN0 628 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 EPHX3Q9H6B9 360 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 SLC28A3Q9HAS3 691 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 IL23AQ9NPF7 189 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 ADAMTS5Q9UNA0 930 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
GPNMB-211ENST00000479625 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
GPNMB-211ENST00000479625 CYP2D7A0A087X1C5 515 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 ARVCFO00192 962 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 VWA5AO00534 786 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
GPNMB-211ENST00000479625 STAT3P40763 770 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 PPP2R2DQ66LE6 453 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 OTOP2Q7RTS6 562 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 SSH3Q8TE77 659 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 HERVK_113Q902F9 699 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 ARHGAP45Q92619 1136 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 VTI1AQ96AJ9 217 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
GPNMB-211ENST00000479625 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
GPNMB-211ENST00000479625 HCN4Q9Y3Q4 1203 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 RIPK3Q9Y572 518 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 ELP1O95163 1332 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 SYNGAP1Q96PV0 1343 aa11.74□□□□□ -0.53
GPNMB-211ENST00000479625 WDFY4Q6ZS81 3184 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 A0A0U1RQG5 324 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 RFXAPO00287 272 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 RAD21O60216 631 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 DUSP11O75319 330 aaKnown RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 PDE6AP16499 860 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 SKIV2LQ15477 1246 aaKnown RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 FRAT1Q92837 279 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 FGD4Q96M96 766 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-211ENST00000479625 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
GPNMB-211ENST00000479625 ZNF532Q9HCE3 1301 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 CTAGE5O15320 804 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 TLR3O15455 904 aaKnown RBP11.72□□□□□ -0.53
GPNMB-211ENST00000479625 CD4P01730 458 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 FGBP02675 491 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 PTGS1P23219 599 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 CCL23P55773 120 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 BEX3Q00994 111 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 ACVR2BQ13705 512 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 KRT40Q6A162 431 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 SNRNP48Q6IEG0 339 aaKnown RBP11.72□□□□□ -0.53
GPNMB-211ENST00000479625 MAMDC4Q6UXC1 1216 aa11.72□□□□□ -0.53
GPNMB-211ENST00000479625 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms