RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MFAP1P55081 439 aaKnown RBP16.93■□□□□ 0.3
ATG4B-218ENST00000479554 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-218ENST00000479554 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 SLC39A5Q6ZMH5 540 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 RNF180Q86T96 592 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 LBHD1Q9BQE6 289 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-218ENST00000479554 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-218ENST00000479554 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-218ENST00000479554 PGK1P00558 417 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 SDSP20132 328 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 NOVP48745 357 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 HAND2P61296 217 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 CCDC96Q2M329 555 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 DCAF4Q8WV16 495 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 FERMT2Q96AC1 680 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-218ENST00000479554 LRCH3Q96II8 777 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 RNF146Q9NTX7 359 aa16.92■□□□□ 0.3
ATG4B-218ENST00000479554 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
ATG4B-218ENST00000479554 SNX17Q15036 470 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 TRIM60Q495X7 471 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 FGD4Q96M96 766 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 AGBL1Q96MI9 1066 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-218ENST00000479554 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 PRR12Q9ULL5 1215 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 PHF24Q9UPV7 400 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 ZNF536O15090 1300 aa16.91■□□□□ 0.3
ATG4B-218ENST00000479554 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 TOP1P11387 765 aaKnown RBP16.9■□□□□ 0.3
ATG4B-218ENST00000479554 PCP11498 1178 aaKnown RBP16.9■□□□□ 0.3
ATG4B-218ENST00000479554 ALAS1P13196 640 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 TKFCQ3LXA3 575 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 LRIT3Q3SXY7 679 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 A1CFQ9NQ94 594 aaKnown RBP16.9■□□□□ 0.3
ATG4B-218ENST00000479554 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-218ENST00000479554 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 LTBP2Q14767 1821 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 SMCHD1A6NHR9 2005 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
ATG4B-218ENST00000479554 ADAMTS4O75173 837 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 SNAP25P60880 206 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 ARMCX2Q7L311 632 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 TBC1D10CQ8IV04 446 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 ABHD16BQ9H3Z7 469 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-218ENST00000479554 TCP11L1Q9NUJ3 509 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
ATG4B-218ENST00000479554 A0A1W2PQ45 241 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-218ENST00000479554 A0A1W2PQY0 241 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 HIP1O00291 1037 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 DUSP11O75319 330 aaKnown RBP16.88■□□□□ 0.29
ATG4B-218ENST00000479554 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
ATG4B-218ENST00000479554 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
ATG4B-218ENST00000479554 PDLIM7Q9NR12 457 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
ATG4B-218ENST00000479554 ZNF213O14771 459 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 SLC16A2P36021 539 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 ESR2Q92731 530 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
ATG4B-218ENST00000479554 SPC25Q9HBM1 224 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 MCM3APO60318 1980 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 NEDD4P46934 1319 aa16.87■□□□□ 0.29
ATG4B-218ENST00000479554 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-218ENST00000479554 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 ASB14A6NK59 587 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 ICAM1P05362 532 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 ACLYP53396 1101 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 TLE2Q04725 743 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 SYDE2Q5VT97 1194 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 TTBK2Q6IQ55 1244 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 KLHDC9Q8NEP7 349 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 TTC14Q96N46 770 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 GPCPD1Q9NPB8 672 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 LRRC37A2A6NM11 1700 aa16.86■□□□□ 0.29
ATG4B-218ENST00000479554 SOWAHBA6NEL2 793 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 ADCY6O43306 1168 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 PQBP1O60828 265 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms