RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 FGD4Q96M96 766 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
ABCF1-206ENST00000479542 NACAP1Q9BZK3 213 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 EPB41L4AQ9HCS5 686 aaPredicted RBP15.85■□□□□ 0.13
ABCF1-206ENST00000479542 ARVCFO00192 962 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 RAD21O60216 631 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
ABCF1-206ENST00000479542 CABYRO75952 493 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
ABCF1-206ENST00000479542 BMP3P12645 472 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 PPIGQ13427 754 aaKnown RBP eCLIP15.84■□□□□ 0.136e-8■■□□□ 12
ABCF1-206ENST00000479542 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 CPXCR1Q8N123 301 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 FAM133AQ8N9E0 248 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 Q9Y3F1 56 aa15.84■□□□□ 0.13
ABCF1-206ENST00000479542 A0A0U1RQG5 324 aaPredicted RBP15.83■□□□□ 0.12
ABCF1-206ENST00000479542 ERC2O15083 957 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 ASGR1P07306 291 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 TDO2P48775 406 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 STAT2P52630 851 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 CCDC144BQ3MJ40 725 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 ARMCX2Q7L311 632 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 SYMPKQ92797 1274 aaKnown RBP15.83■□□□□ 0.12
ABCF1-206ENST00000479542 KIFC2Q96AC6 838 aa15.83■□□□□ 0.12
ABCF1-206ENST00000479542 RAVER2Q9HCJ3 691 aaKnown RBP15.83■□□□□ 0.12
ABCF1-206ENST00000479542 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.12
ABCF1-206ENST00000479542 LOC102724159A0A0B4J2E5 919 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 ASB14A6NK59 587 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 CTAGE5O15320 804 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 C6orf222P0C671 652 aaPredicted RBP15.82■□□□□ 0.12
ABCF1-206ENST00000479542 TSPY3P0CV98 308 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 TSPY8P0CW00 308 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 DNAJB2P25686 324 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 NOVP48745 357 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 PWP2Q15269 919 aaKnown RBP15.82■□□□□ 0.12
ABCF1-206ENST00000479542 GNASQ5JWF2 1037 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 TMEM199Q8N511 208 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 MYLIPQ8WY64 445 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 ACAD9Q9H845 621 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 PRUNE2Q8WUY3 3088 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
ABCF1-206ENST00000479542 TLR3O15455 904 aaKnown RBP15.81■□□□□ 0.12
ABCF1-206ENST00000479542 ADCY6O43306 1168 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 CD4P01730 458 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 APPP05067 770 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 FOSL2P15408 326 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 TMEM240Q5SV17 173 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 LENG1Q96BZ8 264 aaPredicted RBP15.81■□□□□ 0.12
ABCF1-206ENST00000479542 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.81■□□□□ 0.129e-12■■□□□ 13.6
ABCF1-206ENST00000479542 BCL11AQ9H165 835 aa15.81■□□□□ 0.12
ABCF1-206ENST00000479542 GNEQ9Y223 722 aaKnown RBP15.81■□□□□ 0.12
ABCF1-206ENST00000479542 ZNF536O15090 1300 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 MYADML2A6NDP7 307 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 M0R2C6 588 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 PPARAQ07869 468 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 ZMYM1Q5SVZ6 1142 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 C20orf194Q5TEA3 1177 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 RCSD1Q6JBY9 416 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 PSRC1Q6PGN9 363 aaPredicted RBP15.8■□□□□ 0.12
ABCF1-206ENST00000479542 C16orf59Q7L2K0 433 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 MORC4Q8TE76 937 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 ZNF576Q9H609 170 aa15.8■□□□□ 0.12
ABCF1-206ENST00000479542 SPTBN5Q9NRC6 3674 aaKnown RBP15.8■□□□□ 0.12
ABCF1-206ENST00000479542 PRDM1O75626 825 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 FGRP09769 529 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 SLC1A4P43007 532 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 TFAP4Q01664 338 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 TNFAIP2Q03169 654 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 GRIN2CQ14957 1233 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 PI4K2BQ8TCG2 481 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 NAPBQ9H115 298 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 A1CFQ9NQ94 594 aaKnown RBP15.79■□□□□ 0.12
ABCF1-206ENST00000479542 ANAPC4Q9UJX5 808 aa15.79■□□□□ 0.12
ABCF1-206ENST00000479542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
ABCF1-206ENST00000479542 ZEB2O60315 1214 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 LRRC47Q8N1G4 583 aaKnown RBP15.78■□□□□ 0.12
ABCF1-206ENST00000479542 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 VTI1AQ96AJ9 217 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 TIFAQ96CG3 184 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
ABCF1-206ENST00000479542 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 ALX1Q15699 326 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 BTNL9Q6UXG8 535 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 STK11IPQ8N1F8 1099 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 MTIF3Q9H2K0 278 aaKnown RBP15.77■□□□□ 0.12
ABCF1-206ENST00000479542 IL23AQ9NPF7 189 aa15.77■□□□□ 0.12
ABCF1-206ENST00000479542 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms