RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NETO1Q8TDF5 533 aa7.26□□□□□ -1.25
RFC4-212ENST00000479307 APPBP2Q92624 585 aa7.26□□□□□ -1.25
RFC4-212ENST00000479307 HDAC8Q9BY41 377 aa7.26□□□□□ -1.25
RFC4-212ENST00000479307 NOL6Q9H6R4 1146 aaKnown RBP7.26□□□□□ -1.25
RFC4-212ENST00000479307 LRRC4CQ9HCJ2 640 aa7.26□□□□□ -1.25
RFC4-212ENST00000479307 SNX11Q9Y5W9 270 aa7.26□□□□□ -1.25
RFC4-212ENST00000479307 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 TRAV20A0A0B4J274 112 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 PRAMEF1O95521 474 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 GSNP06396 782 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 ITIH2P19823 946 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 PPP2R2AP63151 447 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 TMEM67Q5HYA8 995 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 TRIM59Q8IWR1 403 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 FAM181AQ8N9Y4 354 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 ADCY4Q8NFM4 1077 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 BRF1Q92994 677 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 MRGPRX3Q96LB0 322 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 AARSD1Q9BTE6 412 aaKnown RBP7.25□□□□□ -1.25
RFC4-212ENST00000479307 DUSP15Q9H1R2 295 aaPredicted RBP7.25□□□□□ -1.25
RFC4-212ENST00000479307 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
RFC4-212ENST00000479307 SHISA3A0PJX4 238 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 PRR19A6NJB7 356 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 CDC45O75419 566 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 POU4F1Q01851 419 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 CWF19L1Q69YN2 538 aaKnown RBP7.24□□□□□ -1.25
RFC4-212ENST00000479307 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
RFC4-212ENST00000479307 ARHGEF4Q9NR80 690 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 U3KQE9 123 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 GLI2P10070 1586 aa7.24□□□□□ -1.25
RFC4-212ENST00000479307 CUX1P39880 1505 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 CAPNS1P04632 268 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 FAM153BP0C7A2 387 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 FGFR1P11362 822 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 AMPD2Q01433 879 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 SQSTM1Q13501 440 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 PLEKHG4Q58EX7 1191 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 TSPYL5Q86VY4 417 aaPredicted RBP7.23□□□□□ -1.25
RFC4-212ENST00000479307 CCDC140Q96MF4 163 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 FANCLQ9NW38 375 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 PLAGL2Q9UPG8 496 aa7.23□□□□□ -1.25
RFC4-212ENST00000479307 PRG4Q92954 1404 aaPredicted RBP7.23□□□□□ -1.25
RFC4-212ENST00000479307 ABCA10Q8WWZ4 1543 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 ESYT3A0FGR9 886 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 BMP8BP34820 402 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 PPP2R5DQ14738 602 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 TMPRSS7Q7RTY8 843 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 PLD6Q8N2A8 252 aaKnown RBP7.22□□□□□ -1.25
RFC4-212ENST00000479307 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 TCTN2Q96GX1 697 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 CDC6Q99741 560 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 KANSL2Q9H9L4 492 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 SEMA3GQ9NS98 782 aa7.22□□□□□ -1.25
RFC4-212ENST00000479307 ZC3H7BQ9UGR2 993 aaKnown RBP7.22□□□□□ -1.25
RFC4-212ENST00000479307 PCF11O94913 1555 aaKnown RBP7.21□□□□□ -1.25
RFC4-212ENST00000479307 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
RFC4-212ENST00000479307 H0Y8X5 98 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 H3BS24 57 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 KCNH1O95259 989 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 ENDOUP21128 410 aaKnown RBP7.21□□□□□ -1.26
RFC4-212ENST00000479307 TPP2P29144 1249 aaPredicted RBP7.21□□□□□ -1.26
RFC4-212ENST00000479307 HOXC12P31275 282 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 GRIK1P39086 918 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 CTSKP43235 329 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 NOP2P46087 812 aaKnown RBP7.21□□□□□ -1.26
RFC4-212ENST00000479307 TCEA2Q15560 299 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 GAB4Q2WGN9 574 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 TAF7LQ5H9L4 462 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 GTF2IRD2BQ6EKJ0 949 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 INTS5Q6P9B9 1019 aaKnown RBP7.21□□□□□ -1.26
RFC4-212ENST00000479307 GTF2IRD2Q86UP8 949 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 SCUBE1Q8IWY4 988 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 LINC00116Q8NCU8 138 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 HSPA12BQ96MM6 686 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 ZDHHC15Q96MV8 337 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 NKX2-4Q9H2Z4 354 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 PITPNM2Q9BZ72 1349 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 RUSC2Q8N2Y8 1516 aa7.21□□□□□ -1.26
RFC4-212ENST00000479307 TRBV23-1A0A0A0MS06 115 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 MEIS1O00470 390 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 CPP00450 1065 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 PCBP3P57721 371 aaKnown RBP7.2□□□□□ -1.26
RFC4-212ENST00000479307 PRKCQQ04759 706 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 PRSS36Q5K4E3 855 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 CRTC3Q6UUV7 619 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 KIAA0907Q7Z7F0 614 aaPredicted RBP7.2□□□□□ -1.26
RFC4-212ENST00000479307 BTN2A2Q8WVV5 523 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 ASB11Q8WXH4 323 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 HRASLS5Q96KN8 279 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 FEZ1Q99689 392 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 DHRS4Q9BTZ2 278 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 TMX1Q9H3N1 280 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 CYP26B1Q9NR63 512 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
RFC4-212ENST00000479307 MAP3K4Q9Y6R4 1608 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms