RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 MROH8Q9H579 483 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
SRRT-211ENST00000478693 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 ZSWIM8A7E2V4 1837 aa13.23□□□□□ -0.29
SRRT-211ENST00000478693 ICAM1P05362 532 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 NEK4P51957 841 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 PRMT2P55345 433 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 PKN2Q16513 984 aaKnown RBP13.22□□□□□ -0.29
SRRT-211ENST00000478693 USH1GQ495M9 461 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 MMP19Q99542 508 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 BACH2Q9BYV9 841 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
SRRT-211ENST00000478693 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 FBXO40Q9UH90 709 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 PARP14Q460N5 1801 aa13.22□□□□□ -0.29
SRRT-211ENST00000478693 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 FCER1AP12319 257 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 RGS2P41220 211 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
SRRT-211ENST00000478693 CAP1Q01518 475 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 STK3Q13188 491 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
SRRT-211ENST00000478693 KCTD2Q14681 263 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
SRRT-211ENST00000478693 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
SRRT-211ENST00000478693 MCOLN1Q9GZU1 580 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 ACAD9Q9H845 621 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 GABRQQ9UN88 632 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.29
SRRT-211ENST00000478693 RLFQ13129 1914 aa13.21□□□□□ -0.3
SRRT-211ENST00000478693 ZNF536O15090 1300 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 SLC15A5A6NIM6 579 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
SRRT-211ENST00000478693 CYP2B6P20813 491 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 PTPREP23469 700 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 FLT3LGP49771 235 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 RCAN1P53805 252 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 AK2P54819 239 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 FBXO46Q6PJ61 603 aaPredicted RBP13.2□□□□□ -0.3
SRRT-211ENST00000478693 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
SRRT-211ENST00000478693 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 FBXL16Q8N461 479 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 RRP36Q96EU6 259 aaKnown RBP13.2□□□□□ -0.3
SRRT-211ENST00000478693 DDX11Q96FC9 970 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 PIGSQ96S52 555 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 APBA2Q99767 749 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 SLC5A4Q9NY91 659 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
SRRT-211ENST00000478693 COL11A1P12107 1806 aaPredicted RBP13.19□□□□□ -0.3
SRRT-211ENST00000478693 ZBTB5O15062 677 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 STRNO43815 780 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 ADORA2AP29274 412 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
SRRT-211ENST00000478693 TRAF1Q13077 416 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 NSMFQ6X4W1 530 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 TBC1D32Q96NH3 1257 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 SPZ1Q9BXG8 430 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
SRRT-211ENST00000478693 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
SRRT-211ENST00000478693 ABCB11O95342 1321 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 CPLX1O14810 134 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 CYTH3O43739 400 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
SRRT-211ENST00000478693 GRB14Q14449 540 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 RABEP1Q15276 862 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
SRRT-211ENST00000478693 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
SRRT-211ENST00000478693 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
SRRT-211ENST00000478693 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
SRRT-211ENST00000478693 RIOX1Q9H6W3 641 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms