RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	ALPK3	Q96L96	1907 aa		10.44	□□□□□ -0.74
MMS19-215	ENST00000478452	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.44	□□□□□ -0.74
MMS19-215	ENST00000478452	MROH7	Q68CQ1	1323 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	TMEM265	A0A087WTH1	108 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	ARVCF	O00192	962 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	FOSL2	P15408	326 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	CST5	P28325	142 aa	Predicted RBP	10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	SLC1A4	P43007	532 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	STAT2	P52630	851 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	IRX5	P78411	483 aa	Predicted RBP	10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	TNFAIP2	Q03169	654 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	IK	Q13123	557 aa	Predicted RBP	10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	PPP4R3B	Q5MIZ7	849 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	MFSD5	Q6N075	450 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	ARMCX2	Q7L311	632 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	FAM160B2	Q86V87	743 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	CCDC144CP	Q8IYA2	1237 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	TMEM199	Q8N511	208 aa		10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	SEC62	Q99442	399 aa	Known RBP	10.43	□□□□□ -0.74
MMS19-215	ENST00000478452	CDK5RAP2	Q96SN8	1893 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	TTC41P	Q6P2S7	1318 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452		A0A0U1RQG5	324 aa	Predicted RBP	10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	MYADML2	A6NDP7	307 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	ASB14	A6NK59	587 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	TLR3	O15455	904 aa	Known RBP	10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	CNTN2	Q02246	1040 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	PPARA	Q07869	468 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	GRIN2C	Q14957	1233 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	TKFC	Q3LXA3	575 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	RCSD1	Q6JBY9	416 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	CHMP4C	Q96CF2	233 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	GMCL1	Q96IK5	515 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	AGBL1	Q96MI9	1066 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	FSD1	Q9BTV5	496 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	UPF3A	Q9H1J1	476 aa	Known RBP	10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	ACAD9	Q9H845	621 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	TBX21	Q9UL17	535 aa		10.42	□□□□□ -0.74
MMS19-215	ENST00000478452	ROBO3	Q96MS0	1386 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	TSPY2	A6NKD2	308 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	DYNC1LI2	O43237	492 aa	Predicted RBP	10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	PLA2G6	O60733	806 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	ALAS1	P13196	640 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	NKX3-2	P78367	333 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	PPIG	Q13427	754 aa	Known RBP eCLIP	10.41	□□□□□ -0.74	1e-8	■■□□□ 13.2
MMS19-215	ENST00000478452	ZMYM1	Q5SVZ6	1142 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	IQSEC1	Q6DN90	963 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	CCDC129	Q6ZRS4	1044 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	C16orf59	Q7L2K0	433 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	FAM133A	Q8N9E0	248 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	TIFA	Q96CG3	184 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	FGD4	Q96M96	766 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	TRERF1	Q96PN7	1200 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.41	□□□□□ -0.74	5e-8	■□□□□ 10.8
MMS19-215	ENST00000478452	AP5M1	Q9H0R1	490 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	ZNF576	Q9H609	170 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	A1CF	Q9NQ94	594 aa	Known RBP	10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	RNF146	Q9NTX7	359 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	STX8	Q9UNK0	236 aa		10.41	□□□□□ -0.74
MMS19-215	ENST00000478452	SOWAHB	A6NEL2	793 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	ADCY6	O43306	1168 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	ZEB2	O60315	1214 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	CABYR	O75952	493 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	CSF2RA	P15509	400 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	DNAJB2	P25686	324 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	SNAP25	P60880	206 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	BEX3	Q00994	111 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	TMEM240	Q5SV17	173 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	ZNF365	Q70YC5	407 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	KCTD1	Q719H9	257 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	FAM126B	Q8IXS8	530 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	PI4K2B	Q8TCG2	481 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	SYMPK	Q92797	1274 aa	Known RBP	10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	PPP1R12C	Q9BZL4	782 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	KATNBL1	Q9H079	304 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	INCENP	Q9NQS7	918 aa		10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.4	□□□□□ -0.74
MMS19-215	ENST00000478452	ZNF536	O15090	1300 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	CTAGE5	O15320	804 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	RANBP6	O60518	1105 aa	Known RBP	10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	CD4	P01730	458 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	FGB	P02675	491 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	ACR	P10323	421 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	CYP2C18	P33260	490 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	CTDSPL2	Q05D32	466 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	ITGA7	Q13683	1181 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	CXCL17	Q6UXB2	119 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	SEZ6L	Q9BYH1	1024 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	IL17RB	Q9NRM6	502 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	PRR12	Q9ULL5	1215 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	MTMR7	Q9Y216	660 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	GNE	Q9Y223	722 aa	Known RBP	10.39	□□□□□ -0.75
MMS19-215	ENST00000478452		Q9Y3F1	56 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	PCDHB15	Q9Y5E8	787 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	ZNF236	Q9UL36	1845 aa		10.39	□□□□□ -0.75
MMS19-215	ENST00000478452	GRXCR1	A8MXD5	290 aa		10.38	□□□□□ -0.75
MMS19-215	ENST00000478452	NMT2	O60551	498 aa		10.38	□□□□□ -0.75
MMS19-215	ENST00000478452	SMPD1	P17405	629 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms