RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 BMS1Q14692 1282 aaKnown RBP5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 DPY19L1Q2PZI1 675 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 CCDC144BQ3MJ40 725 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 MTERF2Q49AM1 385 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 DPH6Q7L8W6 267 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 ZNF227Q86WZ6 799 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 SLC12A9Q9BXP2 914 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 ADAMTS10Q9H324 1103 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 RC3H2Q9HBD1 1191 aaKnown RBP5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 ZMYM5Q9UJ78 669 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 TMEM59LQ9UK28 342 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 OAS3Q9Y6K5 1087 aaKnown RBP5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 TMEM82A0PJX8 343 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 FAM221BA6H8Z2 402 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 GSTM1P09488 218 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 RALGPS1Q5JS13 557 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 LRRC47Q8N1G4 583 aaKnown RBP5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 SGSM3Q96HU1 749 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 MRGPRX3Q96LB0 322 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 FCRL3Q96P31 734 aaPredicted RBP5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 LGR4Q9BXB1 951 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 CWC22Q9HCG8 908 aaKnown RBP5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 AP5S1Q9NUS5 200 aa5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 GPR55Q9Y2T6 319 aaPredicted RBP5.97□□□□□ -1.45
SMARCA1-204ENST00000478420 STXBP3O00186 592 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 ZGLP1P0C6A0 271 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 IFNGR1P15260 489 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 HK2P52789 917 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 SSRP1Q08945 709 aaKnown RBP5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 RTP2Q5QGT7 225 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 GTF2IRD2BQ6EKJ0 949 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 ZPBP2Q6X784 338 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 GTF2IRD2Q86UP8 949 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 FCRL2Q96LA5 508 aaPredicted RBP5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 PFDN2Q9UHV9 154 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 ZNF281Q9Y2X9 895 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.46
SMARCA1-204ENST00000478420 A0A1W2PQU0 124 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 C2orf71A6NGG8 1288 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 BTBD11A6QL63 1104 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 AURKAO14965 403 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 RAC2P15153 192 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 GDNFP39905 211 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 SEPHS1P49903 392 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 PPP2R2AP63151 447 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 HSP90AA2PQ14568 343 aaPredicted RBP5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 EEF1DP3Q658K8 133 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 OXR1Q8N573 874 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 BTN2A2Q8WVV5 523 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 SPATA9Q9BWV2 254 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 CYP26B1Q9NR63 512 aa5.95□□□□□ -1.46
SMARCA1-204ENST00000478420 FGF10O15520 208 aaPredicted RBP5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 TBX1O43435 398 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 HOXC12P31275 282 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 CHRNEQ04844 493 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 SCRN1Q12765 414 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 SPPL2CQ8IUH8 684 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 KSR1Q8IVT5 923 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 ANKS4BQ8N8V4 417 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 PDZD8Q8NEN9 1154 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 MAP6Q96JE9 813 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 DNAJC7Q99615 494 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 MCMBPQ9BTE3 642 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 G6PC3Q9BUM1 346 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 KRTAP9-9Q9BYP9 154 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 NKX2-4Q9H2Z4 354 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 TNFRSF10DQ9UBN6 386 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 ADGRE2Q9UHX3 823 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 CTNND2Q9UQB3 1225 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 KDM2BQ8NHM5 1336 aa5.94□□□□□ -1.46
SMARCA1-204ENST00000478420 FITM1A5D6W6 292 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 TBC1D8O95759 1140 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 SNRPB2P08579 225 aaKnown RBP5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 KIR2DL1P43626 348 aaPredicted RBP5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 KIR2DL2P43627 348 aaPredicted RBP5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 KCNJ6P48051 423 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 CYP2R1Q6VVX0 501 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 CBLL1Q75N03 491 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 PTCHD1Q96NR3 888 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 AARSD1Q9BTE6 412 aaKnown RBP5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 C19orf73Q9NVV2 129 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 EBF1Q9UH73 591 aa5.93□□□□□ -1.46
SMARCA1-204ENST00000478420 TRAV20A0A0B4J274 112 aa5.92□□□□□ -1.46
SMARCA1-204ENST00000478420 BIN1O00499 593 aa5.92□□□□□ -1.46
SMARCA1-204ENST00000478420 DIAPH1O60610 1272 aaKnown RBP5.92□□□□□ -1.46
SMARCA1-204ENST00000478420 IGSF3O75054 1194 aa5.92□□□□□ -1.46
SMARCA1-204ENST00000478420 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
SMARCA1-204ENST00000478420 CPP00450 1065 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms