RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
SMARCE1-209ENST00000478349 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.07■□□□□ 0.32
SMARCE1-209ENST00000478349 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
SMARCE1-209ENST00000478349 SYNRGQ9UMZ2 1314 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 A0A1W2PQ45 241 aaPredicted RBP17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 A0A1W2PQY0 241 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 ASB14A6NK59 587 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 CLTBP09497 229 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 MCCP23508 829 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 PDLIM7Q9NR12 457 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 RNF146Q9NTX7 359 aa17.06■□□□□ 0.32
SMARCE1-209ENST00000478349 DCDC2CA8MYV0 355 aa17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 ADAMTS4O75173 837 aa17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 TAL1P17542 331 aaPredicted RBP17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 CST5P28325 142 aaPredicted RBP17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 ACLYP53396 1101 aa17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 ALAS1P13196 640 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 TLE2Q04725 743 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 TOX2Q96NM4 488 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
SMARCE1-209ENST00000478349 ELP1O95163 1332 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 HIP1O00291 1037 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 FOXP2O15409 715 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 PQBP1O60828 265 aaKnown RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 FGRP09769 529 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 RAG1P15918 1043 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 KCTD1Q719H9 257 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 MPHOSPH6Q99547 160 aaKnown RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 A1CFQ9NQ94 594 aaKnown RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 CCPG1Q9ULG6 757 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 STXBP5LQ9Y2K9 1186 aa17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
SMARCE1-209ENST00000478349 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 FGAP02671 866 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 ICAM1P05362 532 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 HSPD1P10809 573 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 ZNF697Q5TEC3 545 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 FAM133AQ8N9E0 248 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 SLC17A8Q8NDX2 589 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 BADQ92934 168 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 LENG1Q96BZ8 264 aaPredicted RBP17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 IL17RBQ9NRM6 502 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 ADD3Q9UEY8 706 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 MTMR7Q9Y216 660 aa17.02■□□□□ 0.32
SMARCE1-209ENST00000478349 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 KIAA0355O15063 1070 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 ZEB2O60315 1214 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 NMT2O60551 498 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 NOVP48745 357 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 GJA9P57773 515 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 KCNA10Q16322 511 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 KLHDC9Q8NEP7 349 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 ESR2Q92731 530 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 TTC14Q96N46 770 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 SEZ6LQ9BYH1 1024 aa17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 UPF3AQ9H1J1 476 aaKnown RBP17.01■□□□□ 0.31
SMARCE1-209ENST00000478349 ZNF536O15090 1300 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 MYH4Q9Y623 1939 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
SMARCE1-209ENST00000478349 CABYRO75952 493 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 TNFAIP2Q03169 654 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 FPGSQ05932 587 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 GNASQ5JWF2 1037 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms